Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2216 |
Symbol | |
ID | 4478612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2662258 |
End bp | 2664231 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639726811 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_869851 |
Protein GI | 117920659 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTATTT TCAATGTGTT TGGAAATGAA GAGGCGCGCC AGCAAAAGGA AGAAGAGCTG CAACGCTATT TCCAATTATT AGATAACAGC GGCAACAGCT TTATGATCGC CGACAGCAAC CGCAATATTA TCTACGCCAA TAAAGCGGTA TTGAATATGT TATCCGAGGC CGAGGCGGAT ATTCGCAAAG AGCTGCCGCA GTTCTCTGTG GCCAAGGTGG TGGGCAGTAA TATCGATATT TTCCATAAAA ATCCGGCTCA TCAACGCAAT ATGCTCGAGC GCCTTACCCA ATCCCATACG GCGCAAATCA CCATAGGTAA ACGGACTTTT AAGCTGATCC TCACACCCAT TATCACACGT GAAAATAAGC ACTTAGGCAC GGGCGTTGAA TGGATTGATA GAACAGAGAG CATAGAGTCC GAGCGGGCGA CGCAGCGCAT TTTAGAGGCG CTGAATAATA CTAGTACCAA TGTGATGATC GCCGATGCCA ACCGCACCAT TATCTATATG AACCGCTCGG TGGAATCGAT GCTGCGCCAA TCTGAGAGTG AGATAAGACA AGCGCTGCCG CATTTCTCCG TGGATAAAAT TCTTGGCAGC TCGATGGATA TTTTCCATAA GAATCCAGCC CATCAAGCCA GTCTGTTAGA CAAGCTCGAT CGTAAATATG AATCGCAGAT CAAAGTGGCC AGTTGTCACT TCCGCTTAAC CGCAAGCCCG ATTATTTCTA AAACGGGTGA GCGGTTAGGC TCTGTCGTCG AATGGCTGGA CCGTACGGTC GAAGTGCAAA TCGAGCAAGA AATCTCGCGC ATCGTCAATG CGGCTGCGGC GGGGGATTTC TCCCAACGGG CCGAGACGCA AGGTAAGCAG GGCTTCTTCT TGATGCTCGC CAATAGCCTC AATGCCTTGA TTGAAACCTC GGATCGCGGT TTGCAGGATG TGGCGCGGGT GTTGATGGCG CTCGCCGAAG GTGATTTAAC CACGCGTATC TATAACGATT ACGAAGGCAC CTTTAATGAT TTGAAAAACT ATTCAAATCA AACGGCTGAA AAGCTCTCTT ACATGATAAG AGACATTCAA AAAGCCGCCG ATACCATCAA TACCGCCTCT TCTGAAATCG CCCAGGGCAA TGCCGATTTA TCGAGTCGTA CCGAGGAGCA AGCATCGAGT CTTGAACAAA CCTCAGCGAG TATGGAAGAG CTGACGGGCA CAGTGAAGTT AAATGCCGAT AACGCCAGTC AAGCCAATGC ACTTGCCTCT AAGGCCGCCG ACGTTGCCGT CGATGGGGGC GAGCTTATCC AGCAAGTGGT GCAAACCATG GCATCGATTA ACGAATCGGC ACGTAAGATC GCCGATATTA TTGGGGTTAT CGATGGCATT GCCTTCCAAA CCAATATCTT AGCGCTTAAT GCCGCGGTCG AAGCGGCCAG AGCCGGCGAG CAAGGCCGTG GATTTGCGGT GGTGGCCTCA GAGGTGAGAA GCCTGGCACA ACGTTCGGCC AACGCGGCCA AGGACATTAA GGCCTTGATC TCAGACTCTG TGACCAAAAT CGAGAGTGGC AACAGTTTAG TCGGCAAATC CGGCGATACT ATGAAAGAAA TCGTCATCGC CATTAAACGG GTGAACGATA TTATGGCCGA AATTGCCTCG GCCTCGAATG AGCAGGCCAT CGGCATCGAT GAGATCAGCA AAGCCGTAGT ACAAATGGAT GAAATGACGC AGCAAAACGC GGCCTTAGTG GAAGAAGCCG CCGCCGCAGC CGAAAGCATG CAGTCACAGG CGCAGCAGTT AGCCGACAGT GTGGCGAACT TTACCGTGGA TGAAGACACC AGCGCTGCGC CCAAATCCGT GGCGAGCACC AAAAAGTTAG CGGTTAAGCA ACCGCCATCG ACAGTGACTC GCATGCCCGT GAAACCTAAG GCGATGGCGC CAAAGGTCAA TAAAGCCGAC CAAGACGAAT GGGAAGATTT TTGA
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Protein sequence | MGIFNVFGNE EARQQKEEEL QRYFQLLDNS GNSFMIADSN RNIIYANKAV LNMLSEAEAD IRKELPQFSV AKVVGSNIDI FHKNPAHQRN MLERLTQSHT AQITIGKRTF KLILTPIITR ENKHLGTGVE WIDRTESIES ERATQRILEA LNNTSTNVMI ADANRTIIYM NRSVESMLRQ SESEIRQALP HFSVDKILGS SMDIFHKNPA HQASLLDKLD RKYESQIKVA SCHFRLTASP IISKTGERLG SVVEWLDRTV EVQIEQEISR IVNAAAAGDF SQRAETQGKQ GFFLMLANSL NALIETSDRG LQDVARVLMA LAEGDLTTRI YNDYEGTFND LKNYSNQTAE KLSYMIRDIQ KAADTINTAS SEIAQGNADL SSRTEEQASS LEQTSASMEE LTGTVKLNAD NASQANALAS KAADVAVDGG ELIQQVVQTM ASINESARKI ADIIGVIDGI AFQTNILALN AAVEAARAGE QGRGFAVVAS EVRSLAQRSA NAAKDIKALI SDSVTKIESG NSLVGKSGDT MKEIVIAIKR VNDIMAEIAS ASNEQAIGID EISKAVVQMD EMTQQNAALV EEAAAAAESM QSQAQQLADS VANFTVDEDT SAAPKSVAST KKLAVKQPPS TVTRMPVKPK AMAPKVNKAD QDEWEDF
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