Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2214 |
Symbol | |
ID | 4478610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2660806 |
End bp | 2661426 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639726809 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_869849 |
Protein GI | 117920657 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.985834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCAAAAC CGAATATTGA GTACCCTGTT ATCGAGCCGA ATCGGTATTT TGACCATCAT TTTGGCTGTG ACGCCGTAAA AATTCTACCA GGAGAATTCT ACGCCACACG GGATCAAACC ATGATAGTCA CAGTGTTAGG CTCATGCATT TCAGTATGCC TCTATGATCC TGACTTAAGA ATTGGGGGAA TGAACCATTT TTTATTACCG AGCGATAATG GCAACAGTTC TGGGATATTA ACCGATTCGG CCCGCTACGG TGTATACGCC ATGGAGTTGC TGATTAACGA GTTGCTCAAA CTCGGTGCGC GGCGCCGCGC CTTGGTCGCT AAAGTGTTTG GTGGCGGCAA CATGCTCAAC GGGATCACCG CCCATAATAT TGGGGAGCGC AATGCGGAGT TTGTGCTCGA GTATTTGCAG GTGGAGCAAA TTCCAATATT GGCAGCGGAT TTACTCGATT TTTATCCTCG AAAAGTATAT TTCTTCCCCG GGACGGGATT AGTCAAAGTA CGAAAAATCA AAACGATGCA TAACAGCACC ATTATGGACA GGGAAAGTGA ATATCGCCTA CGGATCAGGA ATTTGCCCAG TGGCGGAGAT GTAGAATTTT TTGGTGACTA A
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Protein sequence | MPKPNIEYPV IEPNRYFDHH FGCDAVKILP GEFYATRDQT MIVTVLGSCI SVCLYDPDLR IGGMNHFLLP SDNGNSSGIL TDSARYGVYA MELLINELLK LGARRRALVA KVFGGGNMLN GITAHNIGER NAEFVLEYLQ VEQIPILAAD LLDFYPRKVY FFPGTGLVKV RKIKTMHNST IMDRESEYRL RIRNLPSGGD VEFFGD
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