Gene Shewana3_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2209 
Symbol 
ID4478605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2654270 
End bp2655862 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content49% 
IMG OID639726804 
ProductABC transporter related 
Protein accessionYP_869844 
Protein GI117920652 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTCTA CCGCAAATAT CACCATGCAA TTCGGCCCAG AGCCATTATT TGAAAATATC 
TCGGCAAAAT TTGGCAACGG CAACCGTTAT GGTTTGATTG GCGCAAACGG CTGCGGCAAA
TCGACTTTTA TGAAGATCTT AAGTGGCGCC CTCGCCCCAA CCTCGGGCAA CGTGTCGATC
ACGCCGGGCT TAAAGGTCGG CACCCTAAGC CAAGATCAAT TCGCCTTCGA GCAATACACG
GTTATCGATG CGGTGATCAT GGGCGATACC CAGCTGTGGA AAATCAAGCA AGAGCGTGAC
GCGATTTATG CCAAACCCGA TATGACCGAA GAAGACGGCA TGCGTGTGGG CGATCTTGAG
AGTGAATTTG CCGAGATGGA CGGCTACAGC GCCGAGAGCC GCGCGGGCGA AATTCTGATT
GAAGCCGGTA TCGAAGAATC CTTCCACTAT GGCCCAATGT CACAGGTCGC CCCCGGTTGG
AAACTGCGCG TGCTGTTAGC CCAAGCACTG TTTGCGAACC CCGATATATT GCTGCTCGAC
GAGCCCACCA ACAACTTGGA TATTCACACC ATCAGTTGGC TCGAAACTGA GCTGAATAAG
CGCAAATGCA CCATGATCAT TATTTCCCAC GACAGACACT TCTTAAATGC TGTCTGTACC
CATATGGCGG ATATCGATTA CGGTGAGCTG CGGATTTACC CTGGCAACTA CGAATACTTC
CTTGAGCAAT CGGCGCTGCA GCGCGAACAA TTGCTGTCGA GCAACGCCAA AAAGAGCGCT
GAAATTGAAG AGCTGCAAGA CTTCGTTAAC CGATTCGGTG CTAACGCCTC TAAGGCAAAA
CTCGCCAGTT CACGCGCCAA GCGCATGGAC AAAATTAAGT TGGATGAAGT CAAATCCTCC
AGCCGTATCG CGCCGTCAAT CCGCTTCGCG CCAGGCAAGA AGATGCACCG TCAGGCATTG
GTGCTTGAGA ACCTCGCCCA CGGTTTTGAC GGCGAATTGC TATTCGAAGG CGGCGATTTA
ATCCTCGAAG CCGGCGCAAA GCTTGCGATT ATCGGTGAGA ACGGTGTCGG CAAAACGACC
TTATTACGCT GTTTAGTCAA TGAGTTAATC CATAATCAAG GCGTGATTAA GTGGTCTGAA
AACGCTTCCA TTGGTTACTG CCCACAGGAC AGCACCAGCG ATTTTGATAA TGATTTGACT
ATTATTGAAT GGATGGACCA ATGGCGTCAG CCAAAACACA ACGATTTGAT GGTGCGTGCC
ATGTTAGGTC GTTTGCTGTT TACCGAAGAT GATGCCAACA AAAAAGCCAA AAACTGCTCA
GGTGGTGAGA AAAACCGTTT AATTTTCGGC AAGTTAATGA TGCAAGATAT CAACGTCATC
ATTATGGACG AACCGACCAA CCATATGGAT ATGGAAGCGA TTGAATCCTT AAATAATGCC
CTCAAAGATT TTGAAGGCAC ATTGATTTTC GTTAGCCACG ACCGCGAATT TGTGTCCTCG
TTAGCAACCC GCATTATCGA TATTCGCGAT AGAAAATTAG TCAACTTCCA AGGGACCTTT
GATGAGTATT TGGCAAACCT TGCCAGTGCC TAA
 
Protein sequence
MISTANITMQ FGPEPLFENI SAKFGNGNRY GLIGANGCGK STFMKILSGA LAPTSGNVSI 
TPGLKVGTLS QDQFAFEQYT VIDAVIMGDT QLWKIKQERD AIYAKPDMTE EDGMRVGDLE
SEFAEMDGYS AESRAGEILI EAGIEESFHY GPMSQVAPGW KLRVLLAQAL FANPDILLLD
EPTNNLDIHT ISWLETELNK RKCTMIIISH DRHFLNAVCT HMADIDYGEL RIYPGNYEYF
LEQSALQREQ LLSSNAKKSA EIEELQDFVN RFGANASKAK LASSRAKRMD KIKLDEVKSS
SRIAPSIRFA PGKKMHRQAL VLENLAHGFD GELLFEGGDL ILEAGAKLAI IGENGVGKTT
LLRCLVNELI HNQGVIKWSE NASIGYCPQD STSDFDNDLT IIEWMDQWRQ PKHNDLMVRA
MLGRLLFTED DANKKAKNCS GGEKNRLIFG KLMMQDINVI IMDEPTNHMD MEAIESLNNA
LKDFEGTLIF VSHDREFVSS LATRIIDIRD RKLVNFQGTF DEYLANLASA