Gene Shewana3_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2176 
Symbol 
ID4478380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2608848 
End bp2610494 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content44% 
IMG OID639726772 
Producthypothetical protein 
Protein accessionYP_869812 
Protein GI117920620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCC TTGAATTAAA TGATTTAATT AATCGTTTTG AAGGAACAAG TACCTTTCAG 
TCAAAAATGG AGGGCTATGA TTTCGAGCTC TTTTCAGATG AGTGGATGCT CGGTTACAAG
AAAACCCTTT ACCTTGGCTG GATGCACACG TTAGACAGCA ACGTTTTTCT CGATTTGCGA
CTGGCTATCG CTCACGCAGC AAAACATTAT GCTTATAAAA GTCTAAATGG TTTTGTCAGC
ACCTTAAAAA CGCTTTGCCA GTATATAGAG CCCGCAACGT TTGAAGCGTG GTGGCTAACA
CTGACGGACT ATAAAAGGCA TACAAGAGAT ACACTATACG CATTTTGTCA GAGAAGCCAT
GAGTACCGTA GCTCTATCCT GACTCCGCTC TATAATCTCG TTAAGGAAGA AAACCTAGGG
AGAAGCAATT TTCATAAAGG CATCCTTGAT GAAAAAATAG GTGCGTACAG TGAAATCGAG
CGTGATAACC TTCTAGAAGC CCTTAGAATC GAAACGCTCC ATGCGCTCGA GAATGAGTTC
ATCACCACAT CCCCTTTTAT ACGCCTGAGA AGTGTTCTGG CTTGTCAGTT GATGGTCGCC
ATCGTAAGAA GACCGATACA ATTAGTGCAA CTTAAATGGT GTGACCTCTT GCGAGTAGGT
CAAGCGTTTA CCTCACACAA GGAACATAAC CGTGATTGGC AACCTCTGAC ACAGCATCAC
TTTTCTGATG TGGAGCAATT GCACTTGCGA ACCTTTAAAG GAAAAGACGG AGGATTTAGA
CGCAATGCCG AATCACGCTC ACATCGACTC GATCCAAACC TGTCTGAATT GCTACTCCAA
TATTACCAAG CGTATGAAAC CTATCTATGT GTCTGCTTGA GCAAGTGCAA TATCGCATTA
TCTGAGAGTG ACATCAAAGC ACTGATGCAA CGACTGCCAC TGCTTCCGGA CCAAAGTTTA
TTTTCAGCAA AATTTGAGAT GATAGAGAGC CTCTTTCGCT CTGTAAGCGA CACATCCGAA
GCATTTCATC TCTCTTCTGT GAGTCTTTTA AAAAATATTG CTTACCTCTT CAATAAAAAA
CTCGACATTA AAAGTGACCG CATCGCCCAT CAGCCCCTTG TCTTTAAAAA TAATCGCTGG
CGCCACACCC AGTTAACCCT GGCGGCTTGG ATGGGATTAA GCCCCGCACA AGTTGCCGCC
ATTACTGGTG TCACAGTGGC AGCTATCCTA TCTTATCTTG ATTTAAAAGC ACCTGAACGG
GTCAAAATTG ACCAAGCCTT TGCGGGGAAT AGTGTTATCC AGCGTTTTGA TAGCATGTCT
TCGAAAGAGT TACAGCAACA CCATGATTTT GTGGTTAAAA GTCCTTTTGA CGAAGAAATG
GGGCACAAAC TGAACCCCTC CAATTGTGCC AGTTGTCAGT CAAAAGGGGC CGCCCCGATG
GGGTGCTATC CCTGTGATAA CTTTCGACCG TTAGAAACCG CCAATCATCA ACCGTATTTG
GATAAAGCCG AGCGTAAACT GGCGATTAAC AGTCAATCAG CGCATCCCGC CACGGTCAAA
CGGCTGCAAA CCATCATTAC TTATATCCGA GTGACAATTG CGCTGTGTGA AGAGCGAAAA
ATCCTGAAAG TAGGTACGCA GATATGA
 
Protein sequence
MNILELNDLI NRFEGTSTFQ SKMEGYDFEL FSDEWMLGYK KTLYLGWMHT LDSNVFLDLR 
LAIAHAAKHY AYKSLNGFVS TLKTLCQYIE PATFEAWWLT LTDYKRHTRD TLYAFCQRSH
EYRSSILTPL YNLVKEENLG RSNFHKGILD EKIGAYSEIE RDNLLEALRI ETLHALENEF
ITTSPFIRLR SVLACQLMVA IVRRPIQLVQ LKWCDLLRVG QAFTSHKEHN RDWQPLTQHH
FSDVEQLHLR TFKGKDGGFR RNAESRSHRL DPNLSELLLQ YYQAYETYLC VCLSKCNIAL
SESDIKALMQ RLPLLPDQSL FSAKFEMIES LFRSVSDTSE AFHLSSVSLL KNIAYLFNKK
LDIKSDRIAH QPLVFKNNRW RHTQLTLAAW MGLSPAQVAA ITGVTVAAIL SYLDLKAPER
VKIDQAFAGN SVIQRFDSMS SKELQQHHDF VVKSPFDEEM GHKLNPSNCA SCQSKGAAPM
GCYPCDNFRP LETANHQPYL DKAERKLAIN SQSAHPATVK RLQTIITYIR VTIALCEERK
ILKVGTQI