| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2130 |
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| Symbol | |
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| ID | 4478326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2555501 |
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| End bp | 2556478 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726718 |
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| Product | transketolase, central region |
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| Protein accession | YP_869766 |
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| Protein GI | 117920574 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.88258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000129918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCAGAAA TGAATATGTT ACAGGCCGTC AATGAGGCCT TGTCTATCGC CATGCAATCT
GACGAGCGCA TGGTGGTATT TGGTGAAGAC GTTGGCCACT TTGGCGGTGT GTTTCGCGCA
ACCTCAGGTT TACAGGAAAA GTTTGGTCGC AGCCGTTGCT TTAACACGCC GCTGACTGAA
CAAGGCATTG CGGGTTTTGC CAACGGTTTA GCCTCTAATG GCATGACCGC CGTAGCGGAA
ATCCAGTTCG CCGATTACAT CTTTCCAGCG TTCGATCAGA TAGTGAACGA GTCTGCTAAA
TTCCGTTACC GCAGTGGTAA TGAATTTAAT GTGGGAAGCC TAGTGTTTCG TACACCTTAT
GGTGGCGGTA TTGCGGGCGG CCATTATCAT TCACAATCGC CAGAAGCTTA TTTTACCCAA
ACCCCAGGCT TAAAAGTGGT TGTGCCACGC AATCCAGAGC AGGCCAAGGG CTTATTATTA
GCCTCTATTC GCGATAAAAA CCCTGTGGTG TTCTTCGAGC CAAAGCGTTT ATACCGTGCT
TCAGTGGGTG AAGTCCCTGC GGGCGATTAT GAAATCGAGC TGGGTAAAGC CGAAGTAGTG
CGTGAAGGGA AAGACATCAC CTTAGTAGCC TGGGGCGCAC AGATGGAAAT CATCGAAAAA
GCGGCCGACA TGGCGGCAAA AGAGGGGATT TCCTGCGAAA TTATCGACCT ACGTACACTC
GCGCCTTGGG ATGTAGATAC AGTTGCAGAT TCTGTGAAGA AGACAGGCCG CTTACTGATC
AACCACGAAG CGCCATTGAC GGGTGGTTTT GCCGGTGAAA TCGCCGCGAC GATTCAGCAA
GAGTGTTTCT TGTATTTAGA ATCACCCATC AGCCGTGTAT GTGGTCTAGA TACCCCATAT
CCACTGGTCC ACGAAAAAGA ATATATGCCC GATGCGCTCA AAACCTTTGA AGCCATTAAG
GCATCGGTGA ACTTCTAG
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| Protein sequence | MAEMNMLQAV NEALSIAMQS DERMVVFGED VGHFGGVFRA TSGLQEKFGR SRCFNTPLTE
QGIAGFANGL ASNGMTAVAE IQFADYIFPA FDQIVNESAK FRYRSGNEFN VGSLVFRTPY
GGGIAGGHYH SQSPEAYFTQ TPGLKVVVPR NPEQAKGLLL ASIRDKNPVV FFEPKRLYRA
SVGEVPAGDY EIELGKAEVV REGKDITLVA WGAQMEIIEK AADMAAKEGI SCEIIDLRTL
APWDVDTVAD SVKKTGRLLI NHEAPLTGGF AGEIAATIQQ ECFLYLESPI SRVCGLDTPY
PLVHEKEYMP DALKTFEAIK ASVNF
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