| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2111 |
|---|
| Symbol | |
|---|
| ID | 4479519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2534924 |
|---|
| End bp | 2535403 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639726696 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869747 |
|---|
| Protein GI | 117920555 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3198] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0125675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.439118 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC AACAACCCTG GTATAAGCAG TTTTGGCCTT GGTTTTTAAT TATTCTTCCT
TTGTGTGCCG TCGTCGCAAG TTTTACCACG CTAAAAATTG CCCTCTCAAA CTCTGACTCT
CTGGTCGCCG AGGATTATTA CAAAGAAGGC AAAGCCATCA ATATGGACTT GAGTAAGGTC
AAATATGCCA AGCAGCTTGG CATGCAATGG CAACTCGAAC AGAATCATCA TGAACTCCTC
TTCACTCAAC ACGGCGGCCC TGCTTACCAA GCTGCATTAA AAGTTGAATT TTATCACCCA
ACCATTGCCG AAAAAGACAT TAAGACCACA GTCACCGCCG ATGCCAACCA TGTGTATCGC
ATTACTCTGC CCGATGTATT AACCGGTGCT TGGGAAGTCC GTCTGGAAGG TTTTGATGGC
AAATGGCGTA TTCATCAACG TGTCGAACTC AAAGACAACG TCCAATTGTG GTTGAACTAA
|
|---|
| Protein sequence | MSEQQPWYKQ FWPWFLIILP LCAVVASFTT LKIALSNSDS LVAEDYYKEG KAINMDLSKV
KYAKQLGMQW QLEQNHHELL FTQHGGPAYQ AALKVEFYHP TIAEKDIKTT VTADANHVYR
ITLPDVLTGA WEVRLEGFDG KWRIHQRVEL KDNVQLWLN
|
|---|
| |