| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2097 |
|---|
| Symbol | mukB |
|---|
| ID | 4479505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 2517113 |
|---|
| End bp | 2521666 |
|---|
| Gene Length | 4554 bp |
|---|
| Protein Length | 1517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639726682 |
|---|
| Product | cell division protein MukB |
|---|
| Protein accession | YP_869733 |
|---|
| Protein GI | 117920541 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG3096] Uncharacterized protein involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.99247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0125803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAATT ACCCATACAT AAAGAGCCTG TCGCTTGTGG GCGTCAACGG AGTCTCTGCC
AGAACCCTCG ATTTAGTTAA TCCTCATGAA CATCAGACTG ATAGGCAATA TGGCACCGTG
GTTAGCCTTT TAGGCAAAAA TGGTTCAGGG AAAACGACGC TACTTGGGAC CTTTATGTTG
GCTCTCTTAC CCGATATTCG CTCGGTCAGT TTGGGAACAT CGGATAATTT TACTCAGACG
CAGAAGATGC AGGACGCAGA AATGTTTGAG CGCTTGGGTA ATCCGTCTCT TATTGGGTTA
GAGGTTGTAT CTCGTGCTGG TGAAAGAGCG CTGTTTATTG TTCGCTCTGA GCGAGAGACG
GGGTCCCGCT TGAAGTTTGA CACGTTCAGG GTTGGGTTGT TCGATAGTTT AGCACCACTT
GATTTTCTTA TCGTTCGTAA CGGCAACATG GTTACGCCCA GAACTATAGA TGGTATTCGA
GATATAGCTG CCGAGCATGG CTGCCGACTA CAAAGCTTCG ACAAGATTGA TAAATACATG
CTGGCGTTGT TTAACGATGG TATTTTGCCC AGAACATTCA ACCGTTCTAA TGAGCGTTAC
CAATTAGGTC AGATTTTTCA CAGCGCCATG TCAGGAAAAA GAGATCAAGC TATCGGCCGA
GATCTAGCTG ATTTCCTAAT GACGCACTCA AGGACAAATA TCAAAAGTGT GGTCGATGTG
TTGTCTGGAA CAATGCGAAA GCTTAGGCAG ACAAGAGATG ATCTGGCGCA CAACTCCAAA
GACTATGCGT TTTTCAAGGA GTTGTTAGAG AAGTCCTTCA CTGTATCAGC TAAAGCATGG
GCTCAAGCCG AGTACAATTT TTCTCGAGCA GATAAAGAAG CTACATCCTG TCGACAAGAT
GTTTCAGAGT GCAAAGTTTC TATTGAGAAG AGTGATCAGG ATCTTACGGA GTGTCGTTCG
AAACTAGATA CAAGCGTTGA GAATAGAACA TCACTCGAGC AGGAAAGTGA ACAGCTAAAG
CCAAGACTTG CTTCTGCTGT TGAGGGCGAA ATCTTCTACA AGCAGGGTAA ACAAGCCTCT
GTGAGTCTAT TAAAGAAGGA AGCTCAACTT TACGAGAGTT TGAGTTTGTC CCAGTTGGCT
GACGAAGGCG CTGACGCGTC GCGCAACAAA GTTGAACAAG CTAATCAAGA TATCTTGGAT
ATCCAAGCAC AGCTCGCAGA TGTGCAAGAA CGTTTTATCC TTCTTGAGAA AAAGGCGGGG
CAATACCGAA ATGCGAAGTC GTTATTAGAT AGCGTCAAGA GCTGGTGTGG CGATAGCTTT
GAACTAGCGA AGCTTAAGGG CATGATTGAA GAATACACTG CACAATCCAA ACAGCTAGCG
CTAGAGGCGG ACCAGCTGGG AAACAAGCTC AATAGTGCAG AGAATATCAA TGAAATTCAT
GCTAAAGCTG CATCACTGAT TCGACGCGCT GGCGATAGCA TTGACCCAAA CGTCGCAAAG
AATTGGTTTA TCTCTACAGA GCTTAGACTC GAAGAGGAAC GCCCGCTAGC CGTTAGCCTT
GAACAGATGA GAAATGGATT GAGTGCGTTG AAAAGGAATC ATCGTACTGT GAACCGCATG
CTTGATCGCT TTAAGCAAGC AAAGTTACCA CGCATGCCTT CCAATGAATC TGAGTACCAA
CAGCTTACGG AAGACAGAGG AGAAGCTCTT GAGTCGGCGA AGGAGGTGAA AGCGAGTGTC
GATGCTAGGT ATGAGGACGA GCGACATATC CAGGAAGAGC TAAAGATCGA GGTTTCACGT
CTCAAATCGC TGCGAACAGA GTGGCAAAAT TATCAACCTG CGGTTGCACG TTTATATGAA
TGCTTCCCTG ATACTCAATT CACGGCAGAG ATGTTAGATG GGTTGATTAA AAACACGCAG
AGAGAACTCA GGTCATTACG AGAGAATAAC TCCCGAATAG AGAGCAATAT ATTTTCTTTG
AAAGAGAGGA TCCTTTCACT CAGCAACAGG GAAACTGGGT CATTGGAAAC CCTCCAACGT
TTTGCCAGCG ATGTTGGCGG AGTGGCCGTA GCGGACTTGT ATAGCGATAT ACCGTTAGAA
GAAGCTGGAT TCACCGAAGC GGCTTTAGGT CAGCTTATGT GCGCTATCGT AGTGAATGAC
CCGAGCGATG CGGCTAGAAC GCTATTAGCT GAATATGGTG ATAACTGGCC ATTACCTGAC
GTGATCTTAA TGACTGTAAA AAACCACAGT CCTGATCAAC TACGGAGTGG TGGCTATGAC
GCGGACCTGT TTTTTAAAGA TCTTAGTCAA GAGTTTGTAG GTGCTGATCT AGACCTTAAT
CACAACGAAA ATGATGTTCC TTGGGTAGTT CTCAGTGAAC CCTTTGGCGG TATACGTGTT
AGCGGGGTGC CTACTGAACC AGTTTTGGGT AAAGAGGCTC GGGATAAGCT GATAGCAGAT
CTACAAATTG AGTTAAATTC AAAGCAAACT TTGTTTGACA GTAACGATGA GAATATATCG
CTGCTGCAAA GTGGCCTAGA GCAAGCCAAT CGAATCAACG TTAATCCCTC ATTGGCTTTC
GCTGTTGAGC CTAATGTTGA GCTCAAAAAA CAGAAATTAC AACAACAAGG TAATAAGGTA
GCTGACCTGT ACTCTCAAAC GTTGCAAGCG ACCAATCGCG TAAAAACCTT AGAACTACAA
TGCAGTTTGC TTGAACAGCA TGCGGATTCA AGTGATTTGC TAGACGTTAA CTTCGACAAG
GAGATTATGG AAGCAGAGGA ACAAATCATA CGTTCTGAAA AGGCTAAAAA GTATGTCGAT
AGGTACGGCG GTACCTTCTC GCAGATAAAG CAGCAATACC CGAAGATTCG AGAAGATTAT
CAATCTGACA TAGACACGCT AAAGCGACAA CATCAACTCG CTGAACAAGA TCTTAGCAAT
ACCAACAACC GCAAGCGCGA TTTAACCTCG CTTAACCAAG TGGCGAATCA TCTCGCTGAC
GATTACGAGC AAGCACAAAA CGATCTTGCG AAAGAAGATG GAAACGTAAG TTCATTGCGT
GAGAGGCACA AACAGAAACG TGTCATGCTC GATGAGTTGA AGGTTCAGTT GAGAGAAAGC
GAAGATAAAG CACGCAAAAA CAAAGAGGTA CATCTTAAGC TTCAATCGGA ATATTCTGTG
TTAGAAGAGC AGGTTGCGGA ATCAAAACGT AGTTTGTCAA AGCTGACTTA CCCTTATTGC
GAAGGACTCG AAAAACAACT TTCACTCGAT AGCGAAACGA TATCTAAACG ATTGAGAGCG
GCTCAAGAGC AATGTGAATC ACTCCAACTT AAGCAAGTAT CATTAACCGA ACGCCATAAC
ACCCTACTCA AGCAAGTAGA ATCCCTACAG AGTACATCAG TGATTGCAGA AGAGGCGCGT
GAAAATGCAA ATGGTATAAA GCAAAAGGTG CTGGATGCTC TGCCTGCCGG AGCCACAAAA
CATAAGCTAG AGCAAGAAAT GGACGTCTAT TTTAAACTGA TGCATGAAGG TGAGGCCGTC
CAATACACTA ATGGGATTTA CGCAATATCT GGATTGGTCA ATCGCTATGG TTTGAGTCGA
GATGATGAGT TCTCCCAAAA AATAAATAGT TTTAATCTAG AGGGAGGGAC CACCCTGCCT
AGTCTTTGCC AGCTGCATAG TGACGCTATT TCTTTGTTTC GTCGGCAAGC CCGAGGGGAC
ATTATTCGTA GTTCCGAGCC GACAGAGATG CTTACACAAT TGGATAGTGC GTGTAGTCTC
GCTAGGAGAA CACTTGAAAG CGCCGAAGAG CAGTTTCTCA CAGATAGAAA TGAACTAGGA
AATGCCATTG CCCGTCGTGT ACAGGATGAG CAGAAAGCCA TAAGAAGGCT AAGTGCTGAA
ATGATAGGAA TAAGCTTTGG GCAAGTTGCG GCTATTCGTC TAGTACCTAA AAGCGTCCCT
CATTTCGAAG CTACTTTGAA GGCTTTGAGA GGAAGCGACG ATGTCATGGA CGATCTCTTC
AATAATGCTG AAGATGTAGA AGAAGCGCTC GCAACACTAT ATCAAAAAAC CACTGGTGGC
CGGATCGAGG GAGAAAAGCT GCTTGACCAT AAGAACTACA TCAATGTGGT AACAGAAATC
CAGAGAGTTG GTAGTGAAGA ATTTGAGTTA TTGGATGACA AAACACTTTC AACAGGAGAG
CGAATTGGCT CTGGATTGGT TGTCTTAATA GCAATTCTAA AAAACTGGGG ACGGGTCTCA
CATGAAAAAC AACCTTTCTT AATCCCGTTA GTAATGGATG AAGCATCACG TTTGGACTCC
GACGCTCAGA GAACGGTGCA CCAGTTGGCG GTAAAGACCG GAAGTCAGAT TGTAATTGCC
GCACCTGAGT CGCAAGGAAA GATATCAGGT GTTGGCTATC AACTTGTCAG AAGTGCTTCT
AAAGCAGGTA ACAAAGAGAG CCGTGTAATC ATTAGTGGGA TCCGGGATGC TGACAGTTTA
GGGATTGATG AAGAAGCATT TATCGATTCG GTTGTGAGTG GGGCGGCGCA TTGA
|
|---|
| Protein sequence | MRNYPYIKSL SLVGVNGVSA RTLDLVNPHE HQTDRQYGTV VSLLGKNGSG KTTLLGTFML
ALLPDIRSVS LGTSDNFTQT QKMQDAEMFE RLGNPSLIGL EVVSRAGERA LFIVRSERET
GSRLKFDTFR VGLFDSLAPL DFLIVRNGNM VTPRTIDGIR DIAAEHGCRL QSFDKIDKYM
LALFNDGILP RTFNRSNERY QLGQIFHSAM SGKRDQAIGR DLADFLMTHS RTNIKSVVDV
LSGTMRKLRQ TRDDLAHNSK DYAFFKELLE KSFTVSAKAW AQAEYNFSRA DKEATSCRQD
VSECKVSIEK SDQDLTECRS KLDTSVENRT SLEQESEQLK PRLASAVEGE IFYKQGKQAS
VSLLKKEAQL YESLSLSQLA DEGADASRNK VEQANQDILD IQAQLADVQE RFILLEKKAG
QYRNAKSLLD SVKSWCGDSF ELAKLKGMIE EYTAQSKQLA LEADQLGNKL NSAENINEIH
AKAASLIRRA GDSIDPNVAK NWFISTELRL EEERPLAVSL EQMRNGLSAL KRNHRTVNRM
LDRFKQAKLP RMPSNESEYQ QLTEDRGEAL ESAKEVKASV DARYEDERHI QEELKIEVSR
LKSLRTEWQN YQPAVARLYE CFPDTQFTAE MLDGLIKNTQ RELRSLRENN SRIESNIFSL
KERILSLSNR ETGSLETLQR FASDVGGVAV ADLYSDIPLE EAGFTEAALG QLMCAIVVND
PSDAARTLLA EYGDNWPLPD VILMTVKNHS PDQLRSGGYD ADLFFKDLSQ EFVGADLDLN
HNENDVPWVV LSEPFGGIRV SGVPTEPVLG KEARDKLIAD LQIELNSKQT LFDSNDENIS
LLQSGLEQAN RINVNPSLAF AVEPNVELKK QKLQQQGNKV ADLYSQTLQA TNRVKTLELQ
CSLLEQHADS SDLLDVNFDK EIMEAEEQII RSEKAKKYVD RYGGTFSQIK QQYPKIREDY
QSDIDTLKRQ HQLAEQDLSN TNNRKRDLTS LNQVANHLAD DYEQAQNDLA KEDGNVSSLR
ERHKQKRVML DELKVQLRES EDKARKNKEV HLKLQSEYSV LEEQVAESKR SLSKLTYPYC
EGLEKQLSLD SETISKRLRA AQEQCESLQL KQVSLTERHN TLLKQVESLQ STSVIAEEAR
ENANGIKQKV LDALPAGATK HKLEQEMDVY FKLMHEGEAV QYTNGIYAIS GLVNRYGLSR
DDEFSQKINS FNLEGGTTLP SLCQLHSDAI SLFRRQARGD IIRSSEPTEM LTQLDSACSL
ARRTLESAEE QFLTDRNELG NAIARRVQDE QKAIRRLSAE MIGISFGQVA AIRLVPKSVP
HFEATLKALR GSDDVMDDLF NNAEDVEEAL ATLYQKTTGG RIEGEKLLDH KNYINVVTEI
QRVGSEEFEL LDDKTLSTGE RIGSGLVVLI AILKNWGRVS HEKQPFLIPL VMDEASRLDS
DAQRTVHQLA VKTGSQIVIA APESQGKISG VGYQLVRSAS KAGNKESRVI ISGIRDADSL
GIDEEAFIDS VVSGAAH
|
|---|
| |