| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2073 |
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| Symbol | |
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| ID | 4476319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2481278 |
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| End bp | 2482219 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726658 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_869709 |
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| Protein GI | 117920517 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.269264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000246592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACATA ATAAAATCAT TACCGCATTG GGATTATGGG CTGTCAGTGC TACTTGTGCC
TACGCCACCA CAGTGGGCTT TTCACAGGTT GGCTCCGAGA GTGGTTGGCG TACCAGCTTT
AGCGAAGCGG TCAAGGCCGA AGCTAAACAG CGTGGCATCG ATTTGAAATT TGCCGACGCT
CAGCAAAAAC AAGAGAACCA AATCAAAGCC GTGCGCAGCT TTATCGCCCA AGGTGTGGAT
GCCATTATTA TTGCGCCCGT GGTAGAAACA GGTTGGAAAC CCGTACTGAA AGAAGCCAAA
CGCGCCAAAA TCCCAGTCGT GATTGTCGAC CGTAATATCA AGGTCGATGA TGACTCCTTA
TTCCTTACCC GTATCGCCTC CGACTTTAGC GAAGAAGGCC GCAAGATTGG CCAATGGCTT
ATGGATAAAA CCCAAGGTAA CTGCGATATC GCCGAGTTGC AGGGCACGGT AGGTGCAACC
GCAGCGATTG ATCGCGCAGC CGGTTTTAAC CAAGTGATTG CCAATTATCC CAATGCCAAG
ATTGTTCGTA GCCAAACTGG CGAATTTACC CGTGCTAAGG GTAAAGAAGT GATGGAAGGT
TTCCTCAAAG CCCAAAACGG TCAGCCACTG TGCGCCGTGT GGTCGCATAA CGATGAAATG
GCCCTCGGCG CCGTGCAAGC CATTAAAGAA GCCGGTTTAA AACCGGGCAA AGATATTCTG
ATTGTCTCCG TGGACGGTGT TCCCGATTAC TTTAAGGCGA TGGCCGATGG CGATGTCAAT
GCCACGGTTG AGCTTAGCCC ATACTTAGGC GGCCCAGCGT TTGATGCTAT CGATGCCTAC
CTGAAGGGCA ATAAGGATCA GGCCAAGCTT ATTAGCACCA CGGGTGATGT GTTTACCCAA
GAAACCGCTG CCGCAGAGTA CGAAAAGCGC CGCCAGCAAT AA
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| Protein sequence | MKHNKIITAL GLWAVSATCA YATTVGFSQV GSESGWRTSF SEAVKAEAKQ RGIDLKFADA
QQKQENQIKA VRSFIAQGVD AIIIAPVVET GWKPVLKEAK RAKIPVVIVD RNIKVDDDSL
FLTRIASDFS EEGRKIGQWL MDKTQGNCDI AELQGTVGAT AAIDRAAGFN QVIANYPNAK
IVRSQTGEFT RAKGKEVMEG FLKAQNGQPL CAVWSHNDEM ALGAVQAIKE AGLKPGKDIL
IVSVDGVPDY FKAMADGDVN ATVELSPYLG GPAFDAIDAY LKGNKDQAKL ISTTGDVFTQ
ETAAAEYEKR RQQ
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