| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2063 |
|---|
| Symbol | |
|---|
| ID | 4476309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 2469798 |
|---|
| End bp | 2470328 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639726648 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869699 |
|---|
| Protein GI | 117920507 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000155874 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000857525 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGATACAAC AAATTACCCC AGTACCACGC GCCTTAAACG AAGTCAAAAT CCTCGCTAAA
AAGCGCCTTA AAGCCTGCCA AGCTGGCGAT GCAGTGGCGC TAGATAAACT TGCCTCCTTG
ATGAACAAGC AAGGTTTAAC CCAGCTGGAT ATCCAACTCA AGCATTGCCA AGCCGTCTTG
GCCCGAGAGC TCGGTTTTAC TGATTTTAAT CACTGCCAAA GAGTGTTATC GGGGCAAGCG
TTAATTGGTG AAGACTTAGG TACCCTATTC CATAACAGGC GCTGCGATAC CTTGCTTAAT
CATTGGTTTA GCGGTTTTGA TGAGGCGCAG GCTTTTTTAA AGCAAGCACC GCAGATGGTG
TTGTTGCCCT ATAAAAAGCA GTTCTTTGTG GTCAACGGCA GCGACTATAT TGACGCTCTG
GGACTTGTAT TGAACGATCC CGACTGCATT TATTGCACAT GGTTGGGAAG TGAAGCGGTT
GCTGCCTATG AAGCTTTTGC GCTAAGCCTT ATCAGGCATA AGCTCACTTA G
|
|---|
| Protein sequence | MIQQITPVPR ALNEVKILAK KRLKACQAGD AVALDKLASL MNKQGLTQLD IQLKHCQAVL
ARELGFTDFN HCQRVLSGQA LIGEDLGTLF HNRRCDTLLN HWFSGFDEAQ AFLKQAPQMV
LLPYKKQFFV VNGSDYIDAL GLVLNDPDCI YCTWLGSEAV AAYEAFALSL IRHKLT
|
|---|
| |