Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2061 |
Symbol | |
ID | 4476306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2466934 |
End bp | 2467845 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726645 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_869697 |
Protein GI | 117920505 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0159337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000037985 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGCTA TGCTCTCGGA ACAAGCGTTA GAACTCATTG ATATCGTGGC CCGGGTGGGG AGTTTTACGG CGGCAGCCAA TCGACTGCAC AAGGTCCCTT CTGCGGTCAG TTATGCCGTT AAACAAATCG AAGAAGAACT TGGTGTAGTG TTATTTGAGC GCCACCACCG CAGCGTGACC TTGACCCCCG CGGGAGAGCA TTTTGTTAAG CAAGCCAGAA ACTTGCTGAC TCAAATGGAT GAGATGAAAC GCGGCACCCA GCGTGTGGCC AACGGCTGGC AACCCACGCT GTCTATCGCC TTAGATAACA TAGTGCGCGC CGACAGAATT AGCGTATTAA TCGCCGACTT TTACCGTCAT TTCCAAGATA TCGAGCTCAT CATCCGCATC GAGGTCTTTA ACGGCGTGTG GGAGGCGCTT GCGACTGGTC GCAGTGATAT CGCCATTGGC GCAACCACTG CTATCCCTGT GGGGGGCGTA TACCAATATA AGGACATGGG CGATATTCAA TGGGCATTTT TGGTGAGTAA AAACCATCCT TTAGCCAGTA TTGATCGCCC CTTGACCGAT GATGAACTGC GTCCCTTCCC CTCCATTTGT TTGGAAGATA CCTCGCGGGA AATTCCTAAG CGCATGACCT GGTTATTGGA GAATCAACGC AGACTCGTGG TGCCGGATTG GATCCGCGCG ATTAACTGCT TTAGAGAGGG ATTAGGCATC GGCTATATGC CCGTTCATTT AGCCAGCGTA TTTATCAAAG CGGGCGCCTT GGTTGAAAAG CAGCTTGAAA ATCCTAAATT AACCAGCCCC TGCTGCCTAG CTTGGAACGC CGATAAGATG TCGCCCGCCC TCGCCTGGGT GCTCGACTAC TTAGGAGATA CCGATAAGTT ACACCGAGAA TGGCTGGCGT AA
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Protein sequence | MSAMLSEQAL ELIDIVARVG SFTAAANRLH KVPSAVSYAV KQIEEELGVV LFERHHRSVT LTPAGEHFVK QARNLLTQMD EMKRGTQRVA NGWQPTLSIA LDNIVRADRI SVLIADFYRH FQDIELIIRI EVFNGVWEAL ATGRSDIAIG ATTAIPVGGV YQYKDMGDIQ WAFLVSKNHP LASIDRPLTD DELRPFPSIC LEDTSREIPK RMTWLLENQR RLVVPDWIRA INCFREGLGI GYMPVHLASV FIKAGALVEK QLENPKLTSP CCLAWNADKM SPALAWVLDY LGDTDKLHRE WLA
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