Gene Shewana3_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2032 
Symbol 
ID4476397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2430700 
End bp2432328 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content40% 
IMG OID639726615 
Producthypothetical protein 
Protein accessionYP_869669 
Protein GI117920477 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00239636 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTATAA GCAGCCAATT TTCTGATGGA CTTAGTGCAC TAGCAGATTC AGCAGTGACT 
CAAGCAGAGC ATCTTATTTC TTCAGGACGA ATTGACGGTT TGATCATTGG GACAGGGAAA
GCAGATTTCA CCCAAGGAAA TGTTGCATAC AATCTAAATT TGGATAATCG AACTTTTCAG
TTGATAGATG TTCCTGGCAT CGAAGGAGAT GAATCGAGAT TTGTCAAACT AGTTGAAGAA
GCCGTGGCTA AGGCTCATCT GGTAGTTTAT GTAAATGGCA CGAATAAGAA GCCAGAGAAA
ATAACATCTG AAAAAATAAA AAACTATTTA CGTCGCGGTA GTAAAGTTTT TCCACTGATA
AACATTCGTG GGAGTGCAGA TACTTATGAG TTTCCTGAAG ACAGAGAACT GTTATTAAAC
TCCCATGCGA AAGATATTAT TAATCAGACT ACGCATGTAT TAGACAATGT ACTTGGCCGT
TCAGCTTTGT TGCCGGGCCA TGCTGTACAA GGCTTAATTA GTTTTTGCGC GTTGGCTCAT
AATAATGATA CAGCAACAAC CTCTATTCAT CCTGATCGTG AAGTTGACCT GGTAAGGCAT
CAGACCAATT TCCTGAAACA TTTTGGCAAC ACCAGCACTA TGCTCGGATT CAGCGGGATA
AATACTGTTG CTGATGTTGT GCGAGGTAAG CTTGATACAT ATCAGGAAGA CATTATCGAG
TGCAATAAAG ATAAAATTAA ACAGTTGCTT AGCGAGACCA TTAGTTCTTT ACAGTCATCA
CTTGATGAAC TCAACGATTA CATCAGAAAG ATGCAGCCTG AATTTAAAAA ATGTCGTACA
GCTATACAGG AGGCGATAAA GAGTTTTGAA CGTATGACCT TAACTGGCCA AAAAAATACC
TTTCAAAATA CGTTTATACA GCTAATGGAT GAAAGTGATT ACATTGTTGA ACAATACTTC
GGAGACGGTG ATCGGATAAA ATCCAAAATT GAACAAGCTT TCGAGAAATT TGTAGCGGAA
GCACAGACTT CTATAGAAAA ACAAAATGCT GAAAATGTGC AGGATTTGTC ACAAAAAATT
CAAAGTGCTA TCAAACGCCT GCTCGAAGAT ATGCAACGTG TAGAGCTGGA ACAGTCCATT
GCTGCGGAGG CGTTTACTGA TACTAAGTTA AATCATGCCA AGGATCTTGG CTGGAATCTG
GGCTTAAGCG ACTTTGGCTC ATTTGCTTTC CAAGTTGGAA GTTATGCTCT ATCTGGCTTT
ACAATCGGTT CGGCCTTTCC CGTTATAGGT AATATTGCGG GGGCAATTGG CGGTGCTGTA
TTGGGCATCG TCATGGGGCT CTTTGGCCTC TTTACTAGCA AAGAAAAGCG AATCAGAAAT
GCAAAGTCGG AAGTACGCGA AAAGATTGAA GCGGTTTGTG ATGAAAAATT AGCGACCATT
GAAAGTAACG TTGCCAAAAT TGTCGCGAGA GTTCATTCCG AGGTCGAATC TAAAGCCTTA
TCTGCAGTTA ACACACTAGA GAACAATCTA AATGTTCCAG TGCATGTTCT CGAGAAGCAG
ATAAAAGTTC TTACCATTAT TTTGAATAAA GTCAGGGATA TGCAATATGG AACAATTGAA
ACAGTTTGA
 
Protein sequence
MSISSQFSDG LSALADSAVT QAEHLISSGR IDGLIIGTGK ADFTQGNVAY NLNLDNRTFQ 
LIDVPGIEGD ESRFVKLVEE AVAKAHLVVY VNGTNKKPEK ITSEKIKNYL RRGSKVFPLI
NIRGSADTYE FPEDRELLLN SHAKDIINQT THVLDNVLGR SALLPGHAVQ GLISFCALAH
NNDTATTSIH PDREVDLVRH QTNFLKHFGN TSTMLGFSGI NTVADVVRGK LDTYQEDIIE
CNKDKIKQLL SETISSLQSS LDELNDYIRK MQPEFKKCRT AIQEAIKSFE RMTLTGQKNT
FQNTFIQLMD ESDYIVEQYF GDGDRIKSKI EQAFEKFVAE AQTSIEKQNA ENVQDLSQKI
QSAIKRLLED MQRVELEQSI AAEAFTDTKL NHAKDLGWNL GLSDFGSFAF QVGSYALSGF
TIGSAFPVIG NIAGAIGGAV LGIVMGLFGL FTSKEKRIRN AKSEVREKIE AVCDEKLATI
ESNVAKIVAR VHSEVESKAL SAVNTLENNL NVPVHVLEKQ IKVLTIILNK VRDMQYGTIE
TV