Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2032 |
Symbol | |
ID | 4476397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2430700 |
End bp | 2432328 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639726615 |
Product | hypothetical protein |
Protein accession | YP_869669 |
Protein GI | 117920477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00239636 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTATAA GCAGCCAATT TTCTGATGGA CTTAGTGCAC TAGCAGATTC AGCAGTGACT CAAGCAGAGC ATCTTATTTC TTCAGGACGA ATTGACGGTT TGATCATTGG GACAGGGAAA GCAGATTTCA CCCAAGGAAA TGTTGCATAC AATCTAAATT TGGATAATCG AACTTTTCAG TTGATAGATG TTCCTGGCAT CGAAGGAGAT GAATCGAGAT TTGTCAAACT AGTTGAAGAA GCCGTGGCTA AGGCTCATCT GGTAGTTTAT GTAAATGGCA CGAATAAGAA GCCAGAGAAA ATAACATCTG AAAAAATAAA AAACTATTTA CGTCGCGGTA GTAAAGTTTT TCCACTGATA AACATTCGTG GGAGTGCAGA TACTTATGAG TTTCCTGAAG ACAGAGAACT GTTATTAAAC TCCCATGCGA AAGATATTAT TAATCAGACT ACGCATGTAT TAGACAATGT ACTTGGCCGT TCAGCTTTGT TGCCGGGCCA TGCTGTACAA GGCTTAATTA GTTTTTGCGC GTTGGCTCAT AATAATGATA CAGCAACAAC CTCTATTCAT CCTGATCGTG AAGTTGACCT GGTAAGGCAT CAGACCAATT TCCTGAAACA TTTTGGCAAC ACCAGCACTA TGCTCGGATT CAGCGGGATA AATACTGTTG CTGATGTTGT GCGAGGTAAG CTTGATACAT ATCAGGAAGA CATTATCGAG TGCAATAAAG ATAAAATTAA ACAGTTGCTT AGCGAGACCA TTAGTTCTTT ACAGTCATCA CTTGATGAAC TCAACGATTA CATCAGAAAG ATGCAGCCTG AATTTAAAAA ATGTCGTACA GCTATACAGG AGGCGATAAA GAGTTTTGAA CGTATGACCT TAACTGGCCA AAAAAATACC TTTCAAAATA CGTTTATACA GCTAATGGAT GAAAGTGATT ACATTGTTGA ACAATACTTC GGAGACGGTG ATCGGATAAA ATCCAAAATT GAACAAGCTT TCGAGAAATT TGTAGCGGAA GCACAGACTT CTATAGAAAA ACAAAATGCT GAAAATGTGC AGGATTTGTC ACAAAAAATT CAAAGTGCTA TCAAACGCCT GCTCGAAGAT ATGCAACGTG TAGAGCTGGA ACAGTCCATT GCTGCGGAGG CGTTTACTGA TACTAAGTTA AATCATGCCA AGGATCTTGG CTGGAATCTG GGCTTAAGCG ACTTTGGCTC ATTTGCTTTC CAAGTTGGAA GTTATGCTCT ATCTGGCTTT ACAATCGGTT CGGCCTTTCC CGTTATAGGT AATATTGCGG GGGCAATTGG CGGTGCTGTA TTGGGCATCG TCATGGGGCT CTTTGGCCTC TTTACTAGCA AAGAAAAGCG AATCAGAAAT GCAAAGTCGG AAGTACGCGA AAAGATTGAA GCGGTTTGTG ATGAAAAATT AGCGACCATT GAAAGTAACG TTGCCAAAAT TGTCGCGAGA GTTCATTCCG AGGTCGAATC TAAAGCCTTA TCTGCAGTTA ACACACTAGA GAACAATCTA AATGTTCCAG TGCATGTTCT CGAGAAGCAG ATAAAAGTTC TTACCATTAT TTTGAATAAA GTCAGGGATA TGCAATATGG AACAATTGAA ACAGTTTGA
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Protein sequence | MSISSQFSDG LSALADSAVT QAEHLISSGR IDGLIIGTGK ADFTQGNVAY NLNLDNRTFQ LIDVPGIEGD ESRFVKLVEE AVAKAHLVVY VNGTNKKPEK ITSEKIKNYL RRGSKVFPLI NIRGSADTYE FPEDRELLLN SHAKDIINQT THVLDNVLGR SALLPGHAVQ GLISFCALAH NNDTATTSIH PDREVDLVRH QTNFLKHFGN TSTMLGFSGI NTVADVVRGK LDTYQEDIIE CNKDKIKQLL SETISSLQSS LDELNDYIRK MQPEFKKCRT AIQEAIKSFE RMTLTGQKNT FQNTFIQLMD ESDYIVEQYF GDGDRIKSKI EQAFEKFVAE AQTSIEKQNA ENVQDLSQKI QSAIKRLLED MQRVELEQSI AAEAFTDTKL NHAKDLGWNL GLSDFGSFAF QVGSYALSGF TIGSAFPVIG NIAGAIGGAV LGIVMGLFGL FTSKEKRIRN AKSEVREKIE AVCDEKLATI ESNVAKIVAR VHSEVESKAL SAVNTLENNL NVPVHVLEKQ IKVLTIILNK VRDMQYGTIE TV
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