Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2030 |
Symbol | |
ID | 4476395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2428148 |
End bp | 2429917 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639726613 |
Product | hypothetical protein |
Protein accession | YP_869667 |
Protein GI | 117920475 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00309935 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCATTG CTATTGGAGA GGTAATATCA GTCAAAGGAA TTAACATCGT TGTTGAGCTG TACGAAGAAT CCAATAAAGA AACGCTGTTT TATAAAGGAG AGCGTTTCAA CGGAGTTTCG ATACAAGAGC ACATCCTTAT TCGGCGCGGC TTCAAAGATA TTGTTGCTAT CGTGCAAGGC GAATATTTAG ACGAAAAAAT GCCAACTGAA AACGGTCGAA CTTTTGTCAG GAAAATCGAA TTAAAACCAA TTGGTTACTT TCAGGAAAAT CAATTCTACG AAGGTATTAA ATACCTCCCC ATGATCCGAG ATCTTGCTTA CTTGATGAGT GATAAGCAGG TGCGGCAAGT TTATGGTGAG GGGGATGATG ATTTTGTTGT CGGTGAAATT CTTAAAGAAG AATTATCAGT TTCACTGCCG TGGGCAAGCT TGTTCAACAC TCATATCGGT GTATTTGGGA ACACAGGCAG TGGTAAATCT AATACTTTGA CAACGCTCTA CACGAAGTTA TTCTCCCAAA AGTTGAAGCA AATAAATGGC AAAAGCCATT TTGTTGTTAT CGATTTTAAC GGTGAATATA CTGCTGGCCA GCTATGCACT GATCCAAAGT TCAAAAAAGT TTATGATTTA GATACCCGAA AAGATGGACA AAGCAAATTT CCGCTGAGCG AGGCAGTCTT CTGGGATGAA GAGATTTTCG GCATTTTGTT CAAGGCGACT GAAAATACTC AGAAACCGTT TTTGAAGAGA ATTATTACTG GTCGAGAGCG TTTTAAGGAG TTTCCCAATA GCCTTGAAAA CTACACTAAA AAAATACTGG TTAAAGCATT AACGAGTACA TCGCCAAAAA AGGAATTTGC AGAGCTCATA GTCGAAATTG CAGATATTGT TCATGCTGAT GAATTGAAAC AAAAAACCCT GCAGTTAAGC TGGCATAGCA AAAGCGTTAA TTTTTATTTT CTAAATACTG GTACACATCT GAATGGCGGT TCAGATGATT TCGGCTACAA GAATTATTTT GAAGAAAGCA TAAATCAATT AAAAATAGGC AATTTGTCTC ATTTCGAAGA GCTCAAGCTG CGCGTTAATC TTCAGTTATT GTCCGATTTA GTTAATGGTT TTGTTCAATT CGACCATATC CAACCGTTAC TAAAAAGAAT TGAGTCTTCG TTAACGTCTT TACAGCGTGT AATAGAGATA GGTGAAAATC CAAAGCTCCA CCTATTGACG GTTGTTTCAC TGAGAAAATC TAATCAAGAA ATAAAAAAAA TAATTCCACT ACTTTTAGCT AAATACTATT ACGACAGTCA TAAAGTTACT GTTATCAATG ACAGCCCTCC GAAAAAGACT TTTCACATGA TTATCGATGA AGCGCATAAC ATACTGTCTA TGCAGTCAAA CAGGGAAAGT GAAAGCTGGA AAGATTATCG GCTGGAGTTG TTTGAAGAGA TCATCAAAGA AGGCAGAAAA TTTGGTTTTT ACTTAACACT GTCTAGCCAG CGGCCCGCTG ATATTTCGTC AACGATAATG TCTCAAATTC ACAATTTTTT TATTCATCGA CTGGTTAATG ATAGAGATTT GCTGTTGCTT GAAAATTCGA TCAGCACTTT GGATGCCCTC TCACGCTCGA TGATACCTAA CCTTGCAAGA GGCTGTGCGG TCGTGACTGG GACGTCGTTT GATATTCCAA TGATTGTGCA ATTTAAAGCG CTCTCGAAAG AGGCTCAACC AGATAGTGGT GACGTCGACC TAACAAAATT ATGGGGGTAA
|
Protein sequence | MSIAIGEVIS VKGINIVVEL YEESNKETLF YKGERFNGVS IQEHILIRRG FKDIVAIVQG EYLDEKMPTE NGRTFVRKIE LKPIGYFQEN QFYEGIKYLP MIRDLAYLMS DKQVRQVYGE GDDDFVVGEI LKEELSVSLP WASLFNTHIG VFGNTGSGKS NTLTTLYTKL FSQKLKQING KSHFVVIDFN GEYTAGQLCT DPKFKKVYDL DTRKDGQSKF PLSEAVFWDE EIFGILFKAT ENTQKPFLKR IITGRERFKE FPNSLENYTK KILVKALTST SPKKEFAELI VEIADIVHAD ELKQKTLQLS WHSKSVNFYF LNTGTHLNGG SDDFGYKNYF EESINQLKIG NLSHFEELKL RVNLQLLSDL VNGFVQFDHI QPLLKRIESS LTSLQRVIEI GENPKLHLLT VVSLRKSNQE IKKIIPLLLA KYYYDSHKVT VINDSPPKKT FHMIIDEAHN ILSMQSNRES ESWKDYRLEL FEEIIKEGRK FGFYLTLSSQ RPADISSTIM SQIHNFFIHR LVNDRDLLLL ENSISTLDAL SRSMIPNLAR GCAVVTGTSF DIPMIVQFKA LSKEAQPDSG DVDLTKLWG
|
| |