Gene Shewana3_2030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2030 
Symbol 
ID4476395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2428148 
End bp2429917 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content38% 
IMG OID639726613 
Producthypothetical protein 
Protein accessionYP_869667 
Protein GI117920475 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00309935 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATTG CTATTGGAGA GGTAATATCA GTCAAAGGAA TTAACATCGT TGTTGAGCTG 
TACGAAGAAT CCAATAAAGA AACGCTGTTT TATAAAGGAG AGCGTTTCAA CGGAGTTTCG
ATACAAGAGC ACATCCTTAT TCGGCGCGGC TTCAAAGATA TTGTTGCTAT CGTGCAAGGC
GAATATTTAG ACGAAAAAAT GCCAACTGAA AACGGTCGAA CTTTTGTCAG GAAAATCGAA
TTAAAACCAA TTGGTTACTT TCAGGAAAAT CAATTCTACG AAGGTATTAA ATACCTCCCC
ATGATCCGAG ATCTTGCTTA CTTGATGAGT GATAAGCAGG TGCGGCAAGT TTATGGTGAG
GGGGATGATG ATTTTGTTGT CGGTGAAATT CTTAAAGAAG AATTATCAGT TTCACTGCCG
TGGGCAAGCT TGTTCAACAC TCATATCGGT GTATTTGGGA ACACAGGCAG TGGTAAATCT
AATACTTTGA CAACGCTCTA CACGAAGTTA TTCTCCCAAA AGTTGAAGCA AATAAATGGC
AAAAGCCATT TTGTTGTTAT CGATTTTAAC GGTGAATATA CTGCTGGCCA GCTATGCACT
GATCCAAAGT TCAAAAAAGT TTATGATTTA GATACCCGAA AAGATGGACA AAGCAAATTT
CCGCTGAGCG AGGCAGTCTT CTGGGATGAA GAGATTTTCG GCATTTTGTT CAAGGCGACT
GAAAATACTC AGAAACCGTT TTTGAAGAGA ATTATTACTG GTCGAGAGCG TTTTAAGGAG
TTTCCCAATA GCCTTGAAAA CTACACTAAA AAAATACTGG TTAAAGCATT AACGAGTACA
TCGCCAAAAA AGGAATTTGC AGAGCTCATA GTCGAAATTG CAGATATTGT TCATGCTGAT
GAATTGAAAC AAAAAACCCT GCAGTTAAGC TGGCATAGCA AAAGCGTTAA TTTTTATTTT
CTAAATACTG GTACACATCT GAATGGCGGT TCAGATGATT TCGGCTACAA GAATTATTTT
GAAGAAAGCA TAAATCAATT AAAAATAGGC AATTTGTCTC ATTTCGAAGA GCTCAAGCTG
CGCGTTAATC TTCAGTTATT GTCCGATTTA GTTAATGGTT TTGTTCAATT CGACCATATC
CAACCGTTAC TAAAAAGAAT TGAGTCTTCG TTAACGTCTT TACAGCGTGT AATAGAGATA
GGTGAAAATC CAAAGCTCCA CCTATTGACG GTTGTTTCAC TGAGAAAATC TAATCAAGAA
ATAAAAAAAA TAATTCCACT ACTTTTAGCT AAATACTATT ACGACAGTCA TAAAGTTACT
GTTATCAATG ACAGCCCTCC GAAAAAGACT TTTCACATGA TTATCGATGA AGCGCATAAC
ATACTGTCTA TGCAGTCAAA CAGGGAAAGT GAAAGCTGGA AAGATTATCG GCTGGAGTTG
TTTGAAGAGA TCATCAAAGA AGGCAGAAAA TTTGGTTTTT ACTTAACACT GTCTAGCCAG
CGGCCCGCTG ATATTTCGTC AACGATAATG TCTCAAATTC ACAATTTTTT TATTCATCGA
CTGGTTAATG ATAGAGATTT GCTGTTGCTT GAAAATTCGA TCAGCACTTT GGATGCCCTC
TCACGCTCGA TGATACCTAA CCTTGCAAGA GGCTGTGCGG TCGTGACTGG GACGTCGTTT
GATATTCCAA TGATTGTGCA ATTTAAAGCG CTCTCGAAAG AGGCTCAACC AGATAGTGGT
GACGTCGACC TAACAAAATT ATGGGGGTAA
 
Protein sequence
MSIAIGEVIS VKGINIVVEL YEESNKETLF YKGERFNGVS IQEHILIRRG FKDIVAIVQG 
EYLDEKMPTE NGRTFVRKIE LKPIGYFQEN QFYEGIKYLP MIRDLAYLMS DKQVRQVYGE
GDDDFVVGEI LKEELSVSLP WASLFNTHIG VFGNTGSGKS NTLTTLYTKL FSQKLKQING
KSHFVVIDFN GEYTAGQLCT DPKFKKVYDL DTRKDGQSKF PLSEAVFWDE EIFGILFKAT
ENTQKPFLKR IITGRERFKE FPNSLENYTK KILVKALTST SPKKEFAELI VEIADIVHAD
ELKQKTLQLS WHSKSVNFYF LNTGTHLNGG SDDFGYKNYF EESINQLKIG NLSHFEELKL
RVNLQLLSDL VNGFVQFDHI QPLLKRIESS LTSLQRVIEI GENPKLHLLT VVSLRKSNQE
IKKIIPLLLA KYYYDSHKVT VINDSPPKKT FHMIIDEAHN ILSMQSNRES ESWKDYRLEL
FEEIIKEGRK FGFYLTLSSQ RPADISSTIM SQIHNFFIHR LVNDRDLLLL ENSISTLDAL
SRSMIPNLAR GCAVVTGTSF DIPMIVQFKA LSKEAQPDSG DVDLTKLWG