Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2023 |
Symbol | |
ID | 4476388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2418237 |
End bp | 2418473 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639726606 |
Product | hypothetical protein |
Protein accession | YP_869660 |
Protein GI | 117920468 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.220244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000187933 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAACAAA CTTTACTCAA TGCCAAAGAA CTTTCTCAAA GGATAAAGTT TAGTGCGGCA TATATCAATC ATACATTGAA AGATAGTGTG TTCATTGAGG GTATTCACTA CATCAAACCT TTTGGTGGTA GAAAAATTTT TTACATTTGG GAAGAAATAG AGATTGAGCT CTTTAGAAAA GCAGAACGGA GCAAAATCGT TGTACCAATG GCACGCCGAG GTGTTTGCCA TGGGTAA
|
Protein sequence | MKQTLLNAKE LSQRIKFSAA YINHTLKDSV FIEGIHYIKP FGGRKIFYIW EEIEIELFRK AERSKIVVPM ARRGVCHG
|
| |