| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_2016 |
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| Symbol | |
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| ID | 4476380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2405533 |
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| End bp | 2407014 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726598 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_869653 |
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| Protein GI | 117920461 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000590429 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTATT CAGCATTATT GGTTGAAGAC AGTATGTCAC TCGGTGCGCT CTATACGGAG
TATTTGCGCG CGGAGGATAT TAATGTAACC CATGTGCATT ACGGCGCGGA TGCCCTAAAG
GAATTATCGA ACTGGCAGCC CGATCTGTTA ATTCTCGATA TTAAGCTGCC GGATATGTCG
GGTCTCGACA TCCTTAAGCA AGTGCAGCAG AGTCATCCCC ATATCAGCAC CATTATGATC
ACCGCCCACG GCAGCATCGA TATTGCCATC GATGCGATGC GCTCAGGGGC GTTCGACTTC
TTAGTTAAAC CCTTCGATGC CAAGCGACTA TCGATAACGG TGCGTAATGC CCTTAAACAA
AAACAATTAC TCGAGCTTGT GACTCAGTAT GAAAACAGCT TACCAAAAGG TCATTACCAA
GGGTTTATCG GCGACTCGCT GGCAATGCAG AGCGTGTACA AAACCATTGA TTGTGTCGCC
AACAGTAAGG CGTCGGTATT TATTATGGGG GAGAGTGGTA CGGGTAAAGA AGTCTGCGCT
CAAGCCATTC ACCAAGTCGG TAATCGCGCC GACAAACCCT TTATCGCCTT AAACTGCGCA
TCAATCCCGA AAGAACTGAT TGAAAGCGAA ATTTTTGGCC ACTGCAAAGG GGCATTCACC
GGCGCCCATA ACAATCGGGA TGGCGCCGCG ACCCGAGCCG ACGGCGGCAC CTTGTTCCTC
GACGAAATCT GCGAAATGGA TTTAGAACTG CAGAGCAAAT TACTGCGGTT TATCCAAACA
GGGACCTTTC AACGGGTGGG CGGCTCTAAA GAAGAGCATG TGGATATTCG TTTTATCAGT
GCCACCAATC GCGAGCCCTG GGAAGAAGTT AAACTTGGGC ATTTCCGTGA GGATTTGTTT
TATCGCCTGC ATGTTATTCC TATCGAACTG CCACCCCTGC GCGCACGGGG GAATGATGTG
CTCTTGCTGG CCAAACAATT ATTAAAAACC TACAGCAAAG AAGAAGGTAA AAAGTTTATC
GACTTTAATC CTCAGGCTGC AGCCATGCTA CAAGCCTATG ATTGGCCTGG CAATGTAAGG
CAACTACAGA ACGTGATCCG CCAGATTGTG GTACTCAATG ACGCAAGCCA TGTTGAGCCA
AGTATGTTCC CCACACCGCT AAAGCCGCTA GCACAGCCTC AAACAAAAGC TCAGCTGCAG
ACTAAGATGC AAGTCGAAGC GACAAAAGTG GACATTGATA CACTCGTTCA AGTGGCGAGT
CGCGAATTAT TGTCAGAGTC CACGCAAGAG GCGCATACAC ATACAGCTGA TCAACAGCGG
ATCCAACCGC TTTGGTTAAC CGAGAAGCAA ACGATAGAAG GGGCGATAGC CCTGTGTGAT
GGTAATGTCC CTAAAGCGGC CGCACTGCTG GACATTAGCC CATCGACCAT TTATCGCAAA
CGCATGACAT GGGAAGAACA AGCGGAACGT TCAAGCTCAT AA
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| Protein sequence | MNYSALLVED SMSLGALYTE YLRAEDINVT HVHYGADALK ELSNWQPDLL ILDIKLPDMS
GLDILKQVQQ SHPHISTIMI TAHGSIDIAI DAMRSGAFDF LVKPFDAKRL SITVRNALKQ
KQLLELVTQY ENSLPKGHYQ GFIGDSLAMQ SVYKTIDCVA NSKASVFIMG ESGTGKEVCA
QAIHQVGNRA DKPFIALNCA SIPKELIESE IFGHCKGAFT GAHNNRDGAA TRADGGTLFL
DEICEMDLEL QSKLLRFIQT GTFQRVGGSK EEHVDIRFIS ATNREPWEEV KLGHFREDLF
YRLHVIPIEL PPLRARGNDV LLLAKQLLKT YSKEEGKKFI DFNPQAAAML QAYDWPGNVR
QLQNVIRQIV VLNDASHVEP SMFPTPLKPL AQPQTKAQLQ TKMQVEATKV DIDTLVQVAS
RELLSESTQE AHTHTADQQR IQPLWLTEKQ TIEGAIALCD GNVPKAAALL DISPSTIYRK
RMTWEEQAER SSS
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