Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_2007 |
Symbol | |
ID | 4476371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2393139 |
End bp | 2394467 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726589 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_869644 |
Protein GI | 117920452 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0855349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGT GGGCATGGAT ACAAACCCTT AAGTACAACC AAGGTATTCG CCAATTGGGT AGCAGCATAC TGTGGTTAGG CTCAGCCCAA GTCGGCGGGC GTATTGTGCG CCTTGGTTGC AGCATTATCT TAGCCCGTTT ACTTACCCCC GAGGTCTTTG GCCAAGTCGC GATCATTCTG ACCAGTTTTG AAATAGTCAG CATTTTTATT CGCAGGATCA CCTCGGCATC ACTGATCAAG ATGGACGATA GCGCCTTTGC TTCTCATCTC GCCAGCGCCA ATCTGATCAA TATTTTTGTG TGTGTACTGT CTTTTGTTGC CTTGAGCTTA CTCAGTGGCC TGTTAGCGAT TTACTATCAA GACGCACAGA TAGTGAAGCC TATGATACTC ATGGCAACAA GCTATTTGCT CCTCCCCTTT GGCATGCTGC ATGCCGCCGC CAACCTACGC CAAAATAAGA TGCGTATCGT CGCCAAGGCC AACCTGTGGC AGACGGTGGC CGACAGTGTG CTCACCGCTA TCTTAGCGTT ATGCGGTATG GGGATCTGGG GGATTATTCT ACCTAAAGTG CTGGTGGTGT TGATTTGGAT AGCCGTGCAT AGGCAGCATT CTGGTATCCA TAATATTCAC ACTGCCCCAC TCGCGCGTTC TTTCTGCCAG ATAAACTTAA CTCAATGTAA ATCACTATTT CGCTTTGGTA CTCAGGTGGC GCTTGGGGAT CTTTGCCTCG CCCTGAGACA AAATATTGAT TATTTATTAG TGGGTTACTT TTTAGGTGTT GAGGCGCTTG GGATCTATTT CTTCGCGGTC AATACCAGCC TTGGGATTAG CTTAGGGTTA ATTCAAAGCT TTGGCACCGC CTTCTATTCA CATCTTTGTC AGAGTGATGG TGAAGATCCG CTGCTTAAAT ACCGCCACGG TCTGCTGAGT ATCATGCTAG TGACCTTGCC TATCATAGGC TTACAAAGCG CGCTCGCCCC TTGGTATTTA CCGCTAGTGT ATGGCCAACA TTGGCTTGAA GCTGGCGCGC TGCCGGTCTT TATTCTGCTC TGTTTGAGTG GTTTAACGCG TCCCTTGGGT GAAGCCGCGA GTCAACTACT GATCTCCTGC GAGCTTAGTA AGCTGAACTT AGTCTCAAAT GTCGGCTTTA TTGGCCTATT GGCGTTGAGT ATCAGCCTCG GCACCCTGTG GGGGCTGAAA GGCGTCGCCA TGGGCATCTT CCTCTGTTAC CTCATTTGTA TGCCGTTATT TGCCTACTTT GTGATGAAAC CCATAGCAGA AAAACTGCGT TTACCCACCT TATCCCCTTC ATTAGGAGGT TCATTATGA
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Protein sequence | MSKWAWIQTL KYNQGIRQLG SSILWLGSAQ VGGRIVRLGC SIILARLLTP EVFGQVAIIL TSFEIVSIFI RRITSASLIK MDDSAFASHL ASANLINIFV CVLSFVALSL LSGLLAIYYQ DAQIVKPMIL MATSYLLLPF GMLHAAANLR QNKMRIVAKA NLWQTVADSV LTAILALCGM GIWGIILPKV LVVLIWIAVH RQHSGIHNIH TAPLARSFCQ INLTQCKSLF RFGTQVALGD LCLALRQNID YLLVGYFLGV EALGIYFFAV NTSLGISLGL IQSFGTAFYS HLCQSDGEDP LLKYRHGLLS IMLVTLPIIG LQSALAPWYL PLVYGQHWLE AGALPVFILL CLSGLTRPLG EAASQLLISC ELSKLNLVSN VGFIGLLALS ISLGTLWGLK GVAMGIFLCY LICMPLFAYF VMKPIAEKLR LPTLSPSLGG SL
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