Gene Shewana3_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2003 
Symbol 
ID4476367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand- 
Start bp2387814 
End bp2388242 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID639726585 
Productglycerol-3-phosphate cytidylyltransferase 
Protein accessionYP_869640 
Protein GI117920448 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0615] Cytidylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01518] glycerol-3-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.10524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TCATCACTTA TGGCACCTAC GACTTATTCC ACTATGGTCA TGTGAGATTG 
TTTCAGCGCT TAAAAGCCAT GGGCGATAAG CTGATCGTCG GCGTATCGAC CGATGAGTTT 
AATGCGCTTA AGGGCAAAGC AGCCTTTTTC AACTATCAAC AGCGCGCCGA AATGGTGGCC 
GCCTGTAAGT ACGTCGATTT AGTGATCCCC GAGACACACT GGCAGCAAAA ACCTCAGGAT 
ATTGTGGCGT TAGATATCGA CATCTTCGGC ATGGGCGACG ACTGGCAAGG CAAATTTGAT 
TACCTCGGCA CCCTTTGTCA GGTGATTTAC TTAGGCCGAA CCGAAGCGAT TTCAACCACG 
GAAATCAAAA CCAATCTGGC TATGCCACAC ACTAAGGTGG CGCTAGCGAT TCCCCAATTG 
ATTAAGTAA
 
Protein sequence
MKTIITYGTY DLFHYGHVRL FQRLKAMGDK LIVGVSTDEF NALKGKAAFF NYQQRAEMVA 
ACKYVDLVIP ETHWQQKPQD IVALDIDIFG MGDDWQGKFD YLGTLCQVIY LGRTEAISTT 
EIKTNLAMPH TKVALAIPQL IK