Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1974 |
Symbol | |
ID | 4476338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2352012 |
End bp | 2353202 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639726556 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_869611 |
Protein GI | 117920419 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00339161 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000366479 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTAACT CACTCGTCGC AATGCCTGCG GATCCTATCC TCGGCCTATT AACCCAGTAC CGTGAAGACT CACATCCTCA AAAAGTCGAC TTAGGTGTGG GCGTATATAA GGATCCCGCT GGAAACACTC CCATCCTTAA TTGCGTGAAA AAAGCCGAAA AATTCCGTTT AGACACTGAA ACCACCAAAG TGTATATCGG CCCAACCGGT TCACCTCAGT TTAATACCCT GATAACAGAA TTAGCCTTTG GCAGTGATCA CAGCGCGATT ATCACCAACC GCATTCGTAC TGTTTCTACT CCTGGTGGCA CGGGCGCCCT GCGCGTTGCC GGTGATTTTA TTAAACGCTG CAATCCTAAT GCTGTGCTAT GGGTGAGCGA TCCCACATGG GCTAACCATA TAGGCTTGTT TGAAGCGGCG GGTCTGACCG TTAAAACCTA CCCTTACTAT GATTACGACA CTAAATCGTT AAAGTTCGAT GAGATGCTCA GCGCGCTTGC GCAGATTGGC CCGAACGATG TGGTGCTATT CCACGCCTGT TGCCATAACC CAAGCGGGAT GGATTTAACG ACAGAACAAT GGGATAAAGT GGTTGCCCTC ACCAAGGAGC AAGGTTTTAC CCCGCTTATC GACATGGCTT ACCAAGGTTT TGGTGATGGG GTCGATATCG ATGCCTACGG CGTGCGTAAA ATGGCCGCTG CGGTCGATAA TATGATCCTG TGTAGCTCTT GCTCGAAAAA CTTCGGTCTG TACCGTGAGC GTATCGGTTC ATGCTCTGTG GTTGCAAAAG ATGCAAACAC GGCAAACATC GCGCAATCTG TGCTGCTTTA CGTGGTTCGC TGCCTCTACT CCATGCCGCC AGCCCACGGC GCGGCGATTG TCGAAACCAT TCTAGGTTCG GCAGAATTAA AGCAAGAATG GTTAGATGAG CTGAAAGTGA TGCGCGACCG TATCAACGGT AACCGCGCCA TTTTAGTGGA AAAACTCAAA ACCAATGGCG TGGACCGCGA CTTTAGCTTT ATCGCACGCC AAAAAGGCAT GTTCTCTTTC CTAGGGGTTA ATCCTGAGCA AGTCGCGCGT CTGCAGAAAG AATTCAGCAT TTATATGGTG GGTTCGAGTC GCATTAGCAT TGCAGGCATT AGCGAAGACA ATGTGGATTA CTTAGCTAAG TCGATTGCAA AAGTACTGTA A
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Protein sequence | MFNSLVAMPA DPILGLLTQY REDSHPQKVD LGVGVYKDPA GNTPILNCVK KAEKFRLDTE TTKVYIGPTG SPQFNTLITE LAFGSDHSAI ITNRIRTVST PGGTGALRVA GDFIKRCNPN AVLWVSDPTW ANHIGLFEAA GLTVKTYPYY DYDTKSLKFD EMLSALAQIG PNDVVLFHAC CHNPSGMDLT TEQWDKVVAL TKEQGFTPLI DMAYQGFGDG VDIDAYGVRK MAAAVDNMIL CSSCSKNFGL YRERIGSCSV VAKDANTANI AQSVLLYVVR CLYSMPPAHG AAIVETILGS AELKQEWLDE LKVMRDRING NRAILVEKLK TNGVDRDFSF IARQKGMFSF LGVNPEQVAR LQKEFSIYMV GSSRISIAGI SEDNVDYLAK SIAKVL
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