| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1970 |
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| Symbol | |
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| ID | 4479424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2346063 |
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| End bp | 2346737 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639726552 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_869607 |
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| Protein GI | 117920415 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000840588 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000283984 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTTTAG CTGAGGTTAA AGGGGTCTTA TTCGACCTTG ACGGTACCCT TGCCGATACC
GCGCCGGATC TGGTTCAGGC CCTTAACCTC AGTTTGTCGG ATGTCGGTAT CGCAGCAAAA
CCTTTAGCAG ATATGCGTAG CGCTGCCTCC CATGGCAGCT TTGCCTTAGT CGATGCGGCG
ATTCCCGGCG CGGATGACGC CCTGCGCACT CAAGTACAGC AAGGACTCCT CGCCCACTAT
CAAAGGATCA ATGGCGACCA TTGCCAGTTG TTTGATGGTA TCGCCCCCCT GCTCGATTGG
CTCGAGTTGT GCCGCGTACC ATTTGGGGTG ATCACCAATA AACCCGCCCG CTTTACTCGC
CCTCTATTGC ATAAACTTAA GCTCAGCTCA CGTATGCCGG TGATGATCAG TGGCGATTCC
ACTCGTTATC CCAAGCCCCA TACCGCACCA ATGCTATTGG GCGCACAGCA ATTGCAGTGC
CTACCACAGC AAATCCTCTA TTTAGGGGAT GCCGAGCGGG ATTTACTCGC GGCCCAAGCG
GCGGGCATGC TCGGCGTTAT AGCGCTGTGG GGATATTTGG GTGAGGCCGA TACGCCCGAT
GCATGGCCTG CCTATGCACA GTTTACCTCG CCATCGAGTT TGCATTCGGC ATTAAGCCAA
GCATTAGCGA AATAG
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| Protein sequence | MSLAEVKGVL FDLDGTLADT APDLVQALNL SLSDVGIAAK PLADMRSAAS HGSFALVDAA
IPGADDALRT QVQQGLLAHY QRINGDHCQL FDGIAPLLDW LELCRVPFGV ITNKPARFTR
PLLHKLKLSS RMPVMISGDS TRYPKPHTAP MLLGAQQLQC LPQQILYLGD AERDLLAAQA
AGMLGVIALW GYLGEADTPD AWPAYAQFTS PSSLHSALSQ ALAK
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