Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1960 |
Symbol | |
ID | 4479757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 2333947 |
End bp | 2335074 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639726542 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_869597 |
Protein GI | 117920405 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.240759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0797641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA GTGCCAATTT TGATGGCGGA AATATCCAAG TCATTAATCT TGATAATAAA GATGATATTC AACTGGCAAT CCGTCCCGAT GCGGGCGGTG AGTTTTATCA ATGGTTCAAC TTCCGATTCG AAGGTGAGGT GGGTAATCAA TACACCTTAA ATATCATCAA TGCGGGCACC GCTTCCTATC CTAAGGGCTG GCAAGATTAC CATGCGGTCG CCAGTTACGA TCGCCAGCAT TGGTTCCGTG TGCCAACCCA ATATATCGAT GGCAAACTGA GCATTCAGTT AGCGCTTGAT TGTGATGCGA TTCAAATCGC CTACTTTGCA CCCTACAGCT ACGAGCGTCA CTTAGATTTA CTCAGCAACG CACAATTGCA TCCCGATGTT AATCTTGAGC ATTTAGGTCT GACCTTAGAT GGCCGCGATA TCACCCTGAT GAAAGTGGGC GATGGCAATC CTGATAAACG CAATATCTGG ATCACTGCGA GACAACATCC CGGTGAAACC ATGGCGGAAT GGTTAGTCGA AGGCTTAGTG AATCGTCTGC TGGATAACGA TTGTCCAACG GCAAAAGCGC TGCTCGATAA AGCGAATTTC TACATAGTGC CTAACATGAA CCCGGATGGC AGCGTAAGAG GCCATCTGCG TACCAATGCG ATTGGGGTTA ACCTTAACCG TGAATGGCAA ACTCCGAGCT TAGAAAGAAG CCCTGAGGTC TACCATGTAG TGCATAAGAT GCAGCAAACG GGCGTGGATT TGTTTTACGA TGTCCATGGT GATGAAGGCT TGCCCTATGT ATTCCTCGCG GGTTGTGAGG GTGTGCCTGC TTACAATGAA CGATTGGCAC AGCTGCAAGC TGATTTTAGT CAGGCATTAA CCTTGGCCAG TGCCGATTTC CAAACCGAGT TTGGTTACGC TAAAGACGAG CCAGGTCAAG CCAACTTGAC CGTGGCCTCT AATTGGGTAG CACAAACCTT CGATTGCTTG TCGAACACCT TAGAAATGCC TTTTAAAGAC AACAACAACC TGCAGGATCC GTTTGTGGGT TGGTCGCCAG AGCGAAGCAT TTACTTAGGC GAAGCTTCAT TGATTGCCAT GCTCGCCGTG GTTGATAAGT TAAGATAG
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Protein sequence | MRISANFDGG NIQVINLDNK DDIQLAIRPD AGGEFYQWFN FRFEGEVGNQ YTLNIINAGT ASYPKGWQDY HAVASYDRQH WFRVPTQYID GKLSIQLALD CDAIQIAYFA PYSYERHLDL LSNAQLHPDV NLEHLGLTLD GRDITLMKVG DGNPDKRNIW ITARQHPGET MAEWLVEGLV NRLLDNDCPT AKALLDKANF YIVPNMNPDG SVRGHLRTNA IGVNLNREWQ TPSLERSPEV YHVVHKMQQT GVDLFYDVHG DEGLPYVFLA GCEGVPAYNE RLAQLQADFS QALTLASADF QTEFGYAKDE PGQANLTVAS NWVAQTFDCL SNTLEMPFKD NNNLQDPFVG WSPERSIYLG EASLIAMLAV VDKLR
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