Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1924 |
Symbol | |
ID | 4478232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 2287223 |
End bp | 2289736 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639726506 |
Product | glucan 1,4-alpha-glucosidase |
Protein accession | YP_869561 |
Protein GI | 117920369 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGG AATCAACAAC AGTTCGCAGC TTTTCTGACC GTCGCAACTT AAGCCGTAAG CCGATTGCGC TTGCGATTGC CGCAAGCCTT ATCGGCGTTG CCAGCTTAAC AGGCTGCTCA CCCTCGGCCC CCAATGCAGA CGTATCCACA CCGACTGTCG CCAAATCCTC AGACGCAAAC GTACAGATCG CCCCCGGCGC CCCCGGCAAA GCGCCTACTT GGGCGTTCTC CGGTAAAACA GGGATTGGCA CCTCCTATGA GCCTTATACT CACGGGCAAT ATCAAGATAG TGCCCAAAAT CCCATCAGCC GCGTGTGGTT CTCCGTCGCC CAGGGGATTT TAACCGAAAC CATGTACGGT CTTATTCACA ATGCTCAGCT CAAAGAATTG CAATTTGTGA TCACCGGCAA TGGCTTTATC GATACTGAGA AAGACAACAC TATCAGCAGC ATTGAATACT TAGATACCGA CGCCAATGGC CGCCCACAAT CCTTGGCCTA TAAAATTATC AATCGCGACG TTGAAGGTAA GTATCAGATA GAAAAACATA TCTTTACCGA TCCCGACCGC GATACGCTGA TGATGCGCGT GACATTTACC GCCTTTGAAG CGGGCATCAC ACCGCATTTA TACGTTAACC CCCATATCGA TAATGCGGGC GCGAATGATA TTGGTAGAAT CGATCATCAA GCTCTTATTG CTCGCACCGC CGATCCCCAC AGCAGCGTGA TGACGGTGAA ATCGGATATC GATTTTGCGC AGGCGACCAC GGGCTTTGTC GGTGTATCCG ATGGTTTGGC CGATTTAGCC GATAATGGCA AGCTCGATAC CCTTTATCAG GCCACCAGCA GCGCCGAAAA TCCGACTCAA GGCAACATTG CCTTTACCGC CAGTTATCCC ACACTCCAAG CGAATCAACC TCTTAATGTG AATTTGGCGA TTGGTTTTGG CCATGATGAA ACCAGCAGTT TAGCCAATGC CAACGCCAGC TTAACGGCGG GGGATGATGC GGTGCTGAGC CAATACAACG CCGGTTGGCA CAGTTATTTA CAATCGCTAC CCGCGATGCC TGCTATGGCG CAAAGCACCA CAGATAATGG CAAACTGCTG TATACCAGTG CCATGGTACT CAAGGCGCAG GAAGATAAAA CCTACGCGGG CGCCCTTATC GCGTCGCTTT CTAATCCTTG GGGCGATACA GTGCCTGCTG TCACACCCAG CACGGGCTAC AAGGCCGTTT GGCCACGAGA CTTTTACCAG TGCGCCATGG CATTTCTCGC CATGGGCGAT ACCCAAACGC CTAAAGTCGC CTTTGAGTAC CTTAAAAAGG TGCAAGTGAG CGATAAAACT CCAGGCTTTA ACGGCACACC CGGTTGGTTT TTACAAAAGA CCCATGTGGA TGGCCAAATC GAATGGGTGG GAGTACAGCT CGACCAAACG GCGATGCCGA TCATGTTCGG CTGGAAACTC TGGCAGGCAG GTGTGCTGAG TCAAGCAGAA CTGAGCCACT GGTATCAAGA GATGTTAAAA GCCGCGGCGG ACTTTTTAGT TAGCGGCGGT GAGGTCAATC TCGACTGGAA CCACACCCAA ATTACGCCAC CGAAAACTCA GCAAGAACGT TGGGAAGAAC AAGCAGGTTA TTCGCCCTCC ACCACGGCCG CAGTTATCGC AGGCTTAGTG GCTGCGAGTG ATATTGCCAA GGCAGTAAAC GACAGCGATG CTAGTCAGCG TTATTTAGCG ACCGCCAAAA CGCTTAATCA GCAACTTGAA AAACACTTAG TGACGACCCA AGGTTTGCTT ACAGATAGCC AAGGCATTAA GGCGCCTTAT TATCTGCGCT TAAGTCCGAA TGGTGAGCCA AACACCGCCG AGACACTCGC CGCTAATAAT GGTCGAGCGG GATTAGATCA ACGTCAGATC CTCGATGGCG GCTTTTTAGA ACTGGTGCGC TATGGCGTAC GTGGCGCAAC CGATAAGCTG ATTAATCAAA GCCTAGCGCT GGTGGATAAC ACCGAACTTG AGGACAATTT ACGCCTCAAA TACAGCTTTA CTGCAAAAGA TGGCAGCAGT GTTCCGGGCT TTAGACGTTA CGGTAACGAT GGCTACGGTG AAGATACCCT CACTGGCGCA AACTACGCCG AATCGGGCAG TAATAGCGAC AACCAACGCG GCCGCGTCTG GCCCTTCTTC ACCGGCGAGC GTGGACATTT TGAACTGGCC CTTGCCAGTG CTAAGGGAGA GCTAACGGGG GCAAACGCGC AGCAAACCAA ACAGCAGCTT ATCAATACCT ATGTGCAAGG GATGGAAACC TTCGCCAACG CGGGTCTGAT GCTCCCCGAA CAAGCATGGG ACGGTGTAGG TAACGCCACA CGTTACCAAT ATCAACTCGG CCAAGGCACT AACTCCGCCA CCCCGCTCGC CTGGACCCAC GCTGAATATA TCAAGCTGGT GCGTTCAATG AGCGACGGTC GAGTATGGGA TAACTACCCT ATCGTCACAG AAGCGTTGAA ATAA
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Protein sequence | MNMESTTVRS FSDRRNLSRK PIALAIAASL IGVASLTGCS PSAPNADVST PTVAKSSDAN VQIAPGAPGK APTWAFSGKT GIGTSYEPYT HGQYQDSAQN PISRVWFSVA QGILTETMYG LIHNAQLKEL QFVITGNGFI DTEKDNTISS IEYLDTDANG RPQSLAYKII NRDVEGKYQI EKHIFTDPDR DTLMMRVTFT AFEAGITPHL YVNPHIDNAG ANDIGRIDHQ ALIARTADPH SSVMTVKSDI DFAQATTGFV GVSDGLADLA DNGKLDTLYQ ATSSAENPTQ GNIAFTASYP TLQANQPLNV NLAIGFGHDE TSSLANANAS LTAGDDAVLS QYNAGWHSYL QSLPAMPAMA QSTTDNGKLL YTSAMVLKAQ EDKTYAGALI ASLSNPWGDT VPAVTPSTGY KAVWPRDFYQ CAMAFLAMGD TQTPKVAFEY LKKVQVSDKT PGFNGTPGWF LQKTHVDGQI EWVGVQLDQT AMPIMFGWKL WQAGVLSQAE LSHWYQEMLK AAADFLVSGG EVNLDWNHTQ ITPPKTQQER WEEQAGYSPS TTAAVIAGLV AASDIAKAVN DSDASQRYLA TAKTLNQQLE KHLVTTQGLL TDSQGIKAPY YLRLSPNGEP NTAETLAANN GRAGLDQRQI LDGGFLELVR YGVRGATDKL INQSLALVDN TELEDNLRLK YSFTAKDGSS VPGFRRYGND GYGEDTLTGA NYAESGSNSD NQRGRVWPFF TGERGHFELA LASAKGELTG ANAQQTKQQL INTYVQGMET FANAGLMLPE QAWDGVGNAT RYQYQLGQGT NSATPLAWTH AEYIKLVRSM SDGRVWDNYP IVTEALK
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