Gene Shewana3_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1901 
Symbol 
ID4478209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2257970 
End bp2258455 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content50% 
IMG OID639726483 
Productperiplasmic nitrate reductase subunit NapB 
Protein accessionYP_869538 
Protein GI117920346 
COG category[C] Energy production and conversion 
COG ID[COG3043] Nitrate reductase cytochrome c-type subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000726566 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACAT TCAAATTAGT CTCAGCATTC AGTGTGCTTG CCTTCTCCAC CCTGATGATG 
ACCAGCGTGA CTGCGGCGAG CATTCCTGAG GACAGAATTG ATACTTTGCG TCAGGCGCCA
ATCAACGTTG AGCCAACCCC GCCCGCGATG CAGGCGGTGC TGAACAAAGA TATCAAAGAG
ATGCGTAACT ACCCGATGCA GCCACCAGTG ATCCCGCACA AGATCGACGG TTATCAGCTC
GATCTTAAGG TCAACAAGTG TATGTCATGT CATGCCAGAC ACCGCACGGG GGACTCCCAA
GCGCCTATGG TCAGCGTGAC TCACTATATG GATAGGGATA ACAATTTCTT AGCTGAGCTT
TCGCCAAGAC GTTACTTCTG CACTCAGTGC CATGTGCCGC AACTGGATGC CAAATTACTG
GTCGAGAACG ACTTTGTGGA TATGGATCAT CTGATTAAAG CGAACACTGA GCAGAAAACA
CACTAG
 
Protein sequence
MKTFKLVSAF SVLAFSTLMM TSVTAASIPE DRIDTLRQAP INVEPTPPAM QAVLNKDIKE 
MRNYPMQPPV IPHKIDGYQL DLKVNKCMSC HARHRTGDSQ APMVSVTHYM DRDNNFLAEL
SPRRYFCTQC HVPQLDAKLL VENDFVDMDH LIKANTEQKT H