| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1836 |
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| Symbol | |
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| ID | 4477896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2177603 |
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| End bp | 2178484 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639726420 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_869475 |
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| Protein GI | 117920283 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.471013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTTT GGGATGGCAT ATCAGAATTT GTAGCAGTAG CCGAAGTCGA GAACTTTACC
TTGGCCGCAC TGCGCCTCAA TGTGTCCACC GCCCACGTGA GTCGGCAAAT CGGTGCACTG
GAAAATCGAC TCGGTACTAA GCTGTTTTAT CGTACAACAC GCAAGGTATC GCTCACCGAA
GAAGGCACGA TTTATTATCG TCATTGCCGC CAATTGCAAA CAGGCCTCGA GGAGGCCGAG
CGGGCGATTA CCGATCTAAA AGGTTCGCCC CAAGGATTGG TAAAACTCAC CGCACCCGTG
GCCTACGGCG AAAAATTTAT CATGCCATTA CTCAATGATT TTATGGTGCA ATATCCCAGC
GTGGAATTTA ATGTCGACTT GACCAACAGA ACCTTAGATT TGATTGAAGG CGGCTACGAT
TTGGCCATTC GCCTTGGTAA ACTCGCCGAC TCCAGCCTGA TGGCTAAACC CTTGAGTAGC
CGCACCCATT ATGTGGCCGC CTCGCCCAGT TACGTTGAAA AATACGGTGA GCCCCATACG
CTTTCGGAGT TAAATCAACA TAATTGCCTG ATCGGGAATC ACAATTACTG GCGCTTTATT
GAAAATGGCC GCGAGCGCAA TATTAAGGTA CGTGGCAACC TTATCTGCAA CAGCGGTTAC
GCCCTGCGAG ATGCAGCATT AAAGGGTATA GGAATAGTGC AACTCCCTGA TTATTATATT
GAAGAAGATA TACATGCAGG CCGACTCATC TCATTCCTCG ACGCGCACCG CGAAGCTAAA
GAAGGCATTT GGGCGCTCTA TCCGCAGAAT CGTCACCTGA GCGCAAAAGT GCGGGTATTA
GTGGATTATC TCGCGGAAAA ACTGGCGATG GAGGATGCGT AG
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| Protein sequence | MYLWDGISEF VAVAEVENFT LAALRLNVST AHVSRQIGAL ENRLGTKLFY RTTRKVSLTE
EGTIYYRHCR QLQTGLEEAE RAITDLKGSP QGLVKLTAPV AYGEKFIMPL LNDFMVQYPS
VEFNVDLTNR TLDLIEGGYD LAIRLGKLAD SSLMAKPLSS RTHYVAASPS YVEKYGEPHT
LSELNQHNCL IGNHNYWRFI ENGRERNIKV RGNLICNSGY ALRDAALKGI GIVQLPDYYI
EEDIHAGRLI SFLDAHREAK EGIWALYPQN RHLSAKVRVL VDYLAEKLAM EDA
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