Gene Shewana3_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1799 
Symbol 
ID4477488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand- 
Start bp2127115 
End bp2127729 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content54% 
IMG OID639726383 
Productphage integrase family protein 
Protein accessionYP_869438 
Protein GI117920246 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.968459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.396821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGGT GCCCACATTC ATCACATAGC CAATTGAGGG AACCAAGCAT GAACGAAGTC 
GAGGCGGTCA AGAACCGCGA CACCATCAAG CTTATCAGTT ACCTGCTCGA ACGTCACTTT 
GGTCAGCAGA TGGCCAATGT CTGGAATATC GGTCTTAACC TGGCCCTTAG GATCTCGGAC 
TTACTGGCGA TCAAGTTCAG CGATATCGAC GGCGATCGCT TAAATATCAT TGAGCAGAAG 
ACCGGTAAAC GGGCCAGCAT CAAGCTCAAT CCTAAGACAC TGGCGTTGAT TGAGGCGATC 
CACCAGCGTC ACCCCGAGCA TATCTACCTG TTCCAATCCC ACCGCTCGAG CCAAGCCAAA 
GACCGACAGG CCCCCGCGAA ACCACTGACA CGGCGCGCCG TCGCCAAAGC GTTTGCCTTT 
GTCGGTGACG ATATCAAGTT AGCCCTGGGC ACCCACTCGA TGCGTAAAAC CCGCGGCTAT 
CACCTGTACC AAGCCTGCAA AGACATTGGC CGGGTGATGC GTATGCTGCG GCATCAGTCA 
GAAGCGGTCA CCCTGCGTTA TATCGGCATT ACTCAGCAGC AAATCGATAA GGACTTTGTC 
GAGCTGGAAA TCTGA
 
Protein sequence
MGWCPHSSHS QLREPSMNEV EAVKNRDTIK LISYLLERHF GQQMANVWNI GLNLALRISD 
LLAIKFSDID GDRLNIIEQK TGKRASIKLN PKTLALIEAI HQRHPEHIYL FQSHRSSQAK 
DRQAPAKPLT RRAVAKAFAF VGDDIKLALG THSMRKTRGY HLYQACKDIG RVMRMLRHQS 
EAVTLRYIGI TQQQIDKDFV ELEI