| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1750 |
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| Symbol | |
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| ID | 4479583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2063884 |
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| End bp | 2066109 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726333 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_869389 |
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| Protein GI | 117920197 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.307688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATA ACTCACCAAC AATTATTTAT ACCGAAACCG ATGAAGCACC AGCGCTAGCA
ACGCTTTCTC TGTTACCTAT CATCAAAACC TTTACCGATG CGGCGGGTGT TGCGGTTGAA
ACCCGTGATA TTTCTTTATC GGGCCGTGTG ATTGCTAATT TCCCTGAAAA ACTGACTGAC
GCGCAAAAGA TTGGCGATCA CTTAGCTGAG CTGGGTGAAT TAGCGAACCA ACCTGAAGCT
AACATCATCA AACTGCCAAA CATCAGTGCG TCAATCCCGC AGTTAAAAGC TTGTATTTTA
GAGCTTCAAC AGAAAGGTTA CGACATTCCA AATTATCCTG ACGAGCCAAA GACTGACGAA
GAAAAGTCTA TCAAAGCGCG TTACGACAAG ATCAAAGGCA GTGCGGTAAA CCCTGTACTG
CGTGAAGGTA ACTCTGATCG CCGCGCGCCG CTGTCAGTGA AAAACTTCGC TAAGAAAAAC
CCACACTCAA TGGGTAAGTG GACCAAAGAG TCTCAATCAC ACGTTGCTCA CATGAGCGAA
GGTGACTTCT ACGGTAGCGA GCAGTCTGTG ACGCTGGCTA ACGCTGACAC AGTTAACATC
GTACTGTCGC AAAAAGACGG TCAAGAAGTG GTATTGAAAT CTGGCCTGAA ACTGCTGGCT
GGTGAGATCA TCGACGCGTC AGTGATGAGC AAAAAAGCCC TAGTTAGCTT CTTTGAGCGT
GAGATCGCCA ATGCCAAGGC CGAAAACGTG TTGTTATCAC TGCACCTTAA AGCCACCATG
ATGAAAGTGT CCGATCCGAT TATGTTCGGT CACGCAGTCA AAGTATTCTT CAAACCTGTG
TTTGATAAAC ATGCGTCATT ATTTGCTGAG CTAGGCGTTG ATGTGAACAA CGGCTTTGGC
GATGTATATG CCAAAATCGC TAGTTTACCT GCCGATGTTC GTGCACAAAT TGAAGCCGAT
ATCGCCGCCG TTTATGCTGA GCGCCCAGCG CTGGCGATGG TAGATTCTGA CAAAGGCATC
ACCAACTTAC ACGTACCAAG CGACATCATT ATCGATGCTT CTATGCCAGC GGCCATTCGT
TCATCAGGCC AAATGTGGGG TCCTGATGGC AAATTGCACG ATACTAAAGC GCTGATCCCA
GACCGTTGCT ACGCGGGTGT GTATCAAGAA ACCATCGCTT TCTGTAAAGA GCATGGTGCC
TTCGATCCAA GCACTATGGG TAGCGTGCCA AACGTGGGTC TGATGGCGCA AAAAGCCGAA
GAATATGGTA GCCACGATAA AACCTTCGAA ATCCCAGCGG ATGGCGTGGT TAACGTGATT
GATGCCAGTG GCAAAGTGTT AATGAGCCAC AACGTCGAAG CGGGCGATAT TTGGAGAATG
TGCCAAGTTA AAGACGCTCC AATTCGCGAC TGGGTGAAAT TAGCTGTACG CCGTGCACGT
TTAAGCAATA CTCCTGCGGT ATTCTGGTTA GATGCGAATC GCGCCCACGA TGCGCAGCTG
ATCGCTAAAG TGAAGCAATA TCTACCTGAG CATGATACTG ACGGTTTAGA CATCAGCATC
ATGTCACCAG AAGAAGCGAC TCGTTTCTCA TTAGTGCGCA TTAAAGAAGG TAAAGATACT
ATTTCTGTTA CCGGTAACGT ACTGCGTGAC TACCTGACTG ACTTGTTCCC AATCCTCGAA
CTGGGTACCA GTGCTAAGAT GCTGTCTATC GTACCATTAA TGAATGGTGG CGGCCTGTTC
GAAACGGGTG CGGGCGGTAG TGCGCCTAAA CACGTACAAC AGGTTGAAAA AGAAGGTCAC
TTACGTTGGG ACTCATTAGG TGAGTTCCTG GCTTTAGCGG CTTCTTTAGA GCATTTAAGC
CAAACTGTGG GTAATCCTAA GGCACAAGTA CTGGCAGATA CCTTAGATCA AGCCATCGGT
CAGTTCTTAG ATAGCAACAA GTCGCCATCA AGACGCGTTG GTGAGCTGGA TAACCGTGGT
AGTCATTTCT ATCTGGCGAT GTACTGGGCA CAAGCGTTAG CCGCTCAAAC CAAAGACGAG
CAGTTACAAG CTCACTTTAT TCCATTAGCG CACGCGTTAA GCGCAAATGA GCAAGTGATT
GTTGCTGAGC TAAACAATGC GCAAGGTGCG CCAGTGGATT TAGGCGGTTA CTATCGTTTA
GACGCCGCAA AAGCTGAAAA AGCCATGCGC CCAAGCGAGA CACTGAACAA GCTATTAATT
GCTTAA
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| Protein sequence | MKDNSPTIIY TETDEAPALA TLSLLPIIKT FTDAAGVAVE TRDISLSGRV IANFPEKLTD
AQKIGDHLAE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYDIP NYPDEPKTDE
EKSIKARYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWTKE SQSHVAHMSE
GDFYGSEQSV TLANADTVNI VLSQKDGQEV VLKSGLKLLA GEIIDASVMS KKALVSFFER
EIANAKAENV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHASLFAE LGVDVNNGFG
DVYAKIASLP ADVRAQIEAD IAAVYAERPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGQMWGPDG KLHDTKALIP DRCYAGVYQE TIAFCKEHGA FDPSTMGSVP NVGLMAQKAE
EYGSHDKTFE IPADGVVNVI DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR
LSNTPAVFWL DANRAHDAQL IAKVKQYLPE HDTDGLDISI MSPEEATRFS LVRIKEGKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG
SHFYLAMYWA QALAAQTKDE QLQAHFIPLA HALSANEQVI VAELNNAQGA PVDLGGYYRL
DAAKAEKAMR PSETLNKLLI A
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