| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1749 |
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| Symbol | |
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| ID | 4479582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2062723 |
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| End bp | 2063532 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639726332 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_869388 |
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| Protein GI | 117920196 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA ACAGCACGCC AGCAACCGCA TCCAGCCCAC GCGCCAGCGG CAAACGCCCC
GCAACAGGGC GCGCCAATCC GGCGGATAAC CGCAATAGCG CCAAGAAACC CCATACCTTC
GCCAAGAATG CCAAGCCAAG TTTACAGCAA GGGGCTAATT CTGAGAGACA CAGTGCCAAG
CGAAACAGTG CTGAGCGCAG CGGCGCCAAG TCTCGCCCGC AACAGCGCTC AACGGCTGCA
CGCACAAAAC CCCAAGGCGA GCCGATGATC GTCTTATTTA ATAAGCCGTT CGATGTCCTA
TGCCAATTTA CCGATGAGCA AGGCCGTAAA ACCTTAAAGG ATTACATCCC GATTCCGGGA
GTGTACGCTG CAGGACGATT GGATCGCGAC AGTGAAGGCT TGTTACTCCT CACCAACGAT
GGTCAACTTC AGGCCAAACT CACTGAGCCG AAAAAGAAAA CCTTTAAAAC CTATTGGGTG
CAAGTCGAGG GAGAACCCAC GGATGCGGAT TTAGCAAAAT TGCGCCAAGG GGTTGAATTA
AAAGATGGTA TAACACTCCC CGCTAAGGTC AGCATCATGG CGACGCCGAA TGTTTGGCCG
CGTAATCCGC CGATTCGTGA GCGAAAAAAC ATCCCTACCA CTTGGCTGGA GATTCAAATC
CATGAAGGAC GCAATCGCCA AGTTCGGCGG ATGACGGCCC ATATTGGTTT TCCAACCTTA
AGACTCATTC GTTATAAAAT AGGCCAATGG AGTCTAGATG ATTTAGCCAC GGGTGAGCAT
AAATGCATCC AAGTGACTCA AAAGGCTTAA
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| Protein sequence | MNKNSTPATA SSPRASGKRP ATGRANPADN RNSAKKPHTF AKNAKPSLQQ GANSERHSAK
RNSAERSGAK SRPQQRSTAA RTKPQGEPMI VLFNKPFDVL CQFTDEQGRK TLKDYIPIPG
VYAAGRLDRD SEGLLLLTND GQLQAKLTEP KKKTFKTYWV QVEGEPTDAD LAKLRQGVEL
KDGITLPAKV SIMATPNVWP RNPPIRERKN IPTTWLEIQI HEGRNRQVRR MTAHIGFPTL
RLIRYKIGQW SLDDLATGEH KCIQVTQKA
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