| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1734 |
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| Symbol | |
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| ID | 4479567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2042126 |
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| End bp | 2043190 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726317 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_869373 |
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| Protein GI | 117920181 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000161072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.128894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTA AAACAGACGA ATTACGCACT TCCTTATTAG CTAAAGTCAT CTCACCTGCA
CAACTGGCAT CTGAGTACCC GTTAACCCAA GATGCAGCCG ATTATCTCGT TCAGCAACGT
CGTGAAGTCG AAGCCATTAT TATGGGCGAA GATCAACGCC TATTAGTGAT CATTGGCCCC
TGCTCCATCC ATGATACTCA AGCCGCCCTC GACTACGCTC GCCGTTTAGC AGTATTGCAT
CAAGAGTTGA AGGACGATCT CTGCATTTTA ATGCGCGTAT ATTTTGAAAA GCCACGCACT
ATCGTCGGTT GGAAAGGGTT AATCTCCGAT CCTGATTTAG ACGGCAGCTT CGAGCCAAAT
AAAGGTTTAC GTATTGCACG CGAGTTATTG CAGCAAATCA CAGAGCTCAA ATTACCGATT
GCCACCGAAT TTTTAGATAT GGTGAACGGT CAATACATTG CCGACCTAAT CACCTGGGGC
GCTATCGGTG CCCGCACCAC CGAAAGCCAA GTCCACCGCG AAATGGCCTC GGCACTCTCC
TGCCCCGTGG GCTTTAAAAA CGGTACCGAT GGCAATATTA ATATCGCCGT CGATGCGGTG
CGCGCAGCAA AAGTGCCACA TATCTTCTAT TCGCCTGATA AAGACGGTGC CATGTCTGTC
TATCGCACCC ATGGTAATCC TTACGGCCAC ATCATTTTAC GTGGCGGTAA AAAGCCGAAT
TACTTTGAGC AAGACATTGA AGAAGCAAGA TTAAAACTTG AGTCTGTCGA TGTAACACCA
CGTATGGTGG TTGATTTTAG CCATGGTAAT AGCGAAAAGA ATCACCTGAA GCAGTTAGTT
GTTGCCGACA ATATCATGGC GCAAATGCGC GCAGGCAGCA CGGCAATTGC GGGGGTGATG
GCCGAAAGTT TCTTACAGGA AGGCAATCAA AAAGTGGTTG AGGGTCAACC TCTGTGTTAC
GGCCAAAGCA TCACAGATGC GTGCCTGCAT TGGGATGACT CGGAAAAGTT ACTGCGCGAT
CTGGCTAAAG CCTCCCGCGA TAGACGTGAG TTTCTCGGCA AATAA
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| Protein sequence | MTIKTDELRT SLLAKVISPA QLASEYPLTQ DAADYLVQQR REVEAIIMGE DQRLLVIIGP
CSIHDTQAAL DYARRLAVLH QELKDDLCIL MRVYFEKPRT IVGWKGLISD PDLDGSFEPN
KGLRIARELL QQITELKLPI ATEFLDMVNG QYIADLITWG AIGARTTESQ VHREMASALS
CPVGFKNGTD GNINIAVDAV RAAKVPHIFY SPDKDGAMSV YRTHGNPYGH IILRGGKKPN
YFEQDIEEAR LKLESVDVTP RMVVDFSHGN SEKNHLKQLV VADNIMAQMR AGSTAIAGVM
AESFLQEGNQ KVVEGQPLCY GQSITDACLH WDDSEKLLRD LAKASRDRRE FLGK
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