| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1727 |
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| Symbol | |
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| ID | 4479560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2030311 |
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| End bp | 2033985 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 639726310 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_869366 |
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| Protein GI | 117920174 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.252949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.106608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAG CGTATAAGGT TTTTCTCGCA GGATTATGTT CACTTTTCTT GGTCGCATGT
GGCGGCGGAG GCAGTATCTC CGACGATGGC ACAGGAACGA CACCCCAGCC TAGTGTAGTG
ACTGTCACTC TTAGTATTTC GAATAGTGAC AATGTTTCAC TTGATACTCC TGCGGAAGTG
CAGGCTACCG TTGTGGATTC TAAAACAGGA CCTAAGGCTG GTATTGTCGT TACATTTAAG
CTCGACAATG ACGAATTGGG CACTTTTACG CCTTCCACTG GTACTCAGTT AACTGATTCA
TCTGGGGTTG CGAAGATCAA GCTTGAAACG AGGAATTTAG CAGGTGCAGG AAGTGTGACT
GCTAGTATTG TAACAGGTGA GTCCGCTAGT ATTGGATTTT ATTCTAAAGG CGATGGAGCC
ATTAATCCGG GAACGGGAAA TAAACTAAAG CTATTTCTTG TGAATGCTCA AGGGCAAGCC
ATAACAAGCA TTAGTACAGC AACTCCTGGA GTTGTTAAAG CACTATATAC TAATAGTTCA
GACGAGCCTC TTGTAGGTAA GGTTATTACC TTTACTTCTA CGTTAGGTAA ATTTCAGCCT
GAATCAGGTA CTGCTCTGAC AGATACACAG GGTCTTGCTA AAATAGCTAT AACAGCAGGA
ACTGTCGCTG GTGCTGGTAA AATTATTGCA AAAGCTGATG ATACAGAGTC AGAAGCTTTT
GGATTTAATA CCTTAGGCGA TGAAGTTGTT GTTAAACCAA TTGATGCCTA TAGCATTGCG
TTAACGATTA CAGATTCACA AGGTCAAGAA TTACGGAATA TTAGTCATAG TGTTCCAGGT
TCTGTGATTG CAACTCTGCG AAAAGATGGG GTTCCAACTA GTTACCAAAC AATTTCATTT
AATTTAACAG GCCAGGGTAC ATTAAATCCT TCATCTGGAA CTGCATTAAC TGACTTGAAT
GGTCATGCAT CAGTGACCTT AGTGACTGGT ACTAATGCTG GGGCTGGTAC TGTCACAGCA
AGTTTTTCAC TTGAAAACGA AACAATAACT GATAGCTTTA ACTTTGAAGT TGCAGGTGAT
GCTCCTGGTG GTAATGGCGA AGCAAATTCT TTGTCTATTC AGCTGACAAA TAGTCAGACA
GGGGTTCCAA CCACCGATAT TAGTGCTACA CAGCCTGGTA AAGTAACTGT TGCTTTAGTG
GATAAAGATT CGACTCCCTT GGTTGGTAAA GTTGTTAGTT TTAGTAGTAC ATTAGGTAAC
TTTCTACCGA CTCAAGGAAC AGCGTTAACA GATTCTCTTG GCCGTGCATC TATTACATTA
ACCGCGGGAA GTATTGAAGG TGCTGGTGAA ATTACTGCAA CTTATGGAAC TGCAAAAGCG
ATTATTGGAT TTGTAACCGC GGGAGATGAA ATTGACCCTG TTGAAGCAAG CCCTGAAATT
AGCTTTGATA TCTATGATTG TAATGATGTT GCAACTTGGG ATAAAGCGTT AAAGAACTTC
GAAGTTTGTA AGGCTACAGA CAATATTACT AATGATAAAC CCGGCATTGT CGGTGCTAAA
GTGACTCGTT CCGGCAGCAC ACAAGCTTTG CAACAAGTGT TGATTACTGC TGCGACTACT
ATAGGGGCAA TTAGCCCAAG CTCAGGCACT GCTATTACAA ATGCTGAAGG TAAAGCAATT
CTCGATTTAT ATGCGAATGG CAATGTTGGA GCTGGAGAGA TTTCACTGAA AGTGAAAGAT
GTAACGGCCA CCAAAGCTTT TGAAATTGGT AGGGTTAATA TTTCACTTAA ACTAGAAACT
TCCCTTGGCG GTAATTTACT TCCAGCTGGT GGTTCCACCA TTTTGGATGT TACTGTTTTA
AATCCAGACG GTTCGTTAGC AACAGGTCAA CCTTTTACTC TTGTATTTAC TTCTGAATGC
CAAGCATCCA ATAAAGCAAT AATTGACTCA CCTGTTATTA CAAATGGTGG AAAGGGATAC
GCGACTTATA GAAGTACTGG TTGCGAAACA CAGGACACAG TATCAGTTTC TGCTATAACA
GGCGGAGGAA GTGTAAGTTC AACAGCTGTA ATCAATATTG ATTCTATTAA AGTTGGAGCT
TTGCAATATG TTACGGCTAG CCCGACATTG TTGGCTTTAC AAGGAACTGG AGGGATCGCA
GGTGCGGGTG CTCGTTCTGA AACATCAGTA GTAACATTCA AGCTGTTAGA TGAAACAGCT
GCACCAGCGG GACAAGAAAG AGTTTGTTTT GAATTAAGCA CCGAAGTAGG AGGGATTAGC
CTAAGTCCTG CTCCATTAGC GCAAGATTAT CTCGATTGCC CTAATTTCCC GAAACCAAAT
TCTCCTAACT ATCCTGCTGA TTTAAGTGTG CCTAATAAGT ATGCTGTTGC CGTAACGGAC
AGTGCAGGAC TCGCTTCTGT TATTGTAAGA AGTGGTGATA GAGCGACTCC TGTAAAAGTT
TTTGCATTAT GGGCAGGGAG TTCTGCGGAT GGCCATAATG GCGTTATTTC AAATGTGTCA
GATCAACTTG CAATCACAAC AGGCCTTGCT GATGATGACA GTTTTTCTGT ATCAGCATCC
ATATTTAATC CTGAAGGTTG GGATTACGAT AATGAAACAG TAGATATTAA TATATTGGCG
GCTGATCATT TTAATAACAT GGTACCCGCT GGCACAGTAA TTGTTTTCAC TGCAGAAGGC
GGTGCAATAC CTGGCTCTTG TACAACTGGT GGTTTAACTA ATCCTGATGG GGCTTGTGGT
GTTCAGTGGC GGAGCCAGAG CCCACGACCA TTTTCGAGTA CAGTAGTGCA ATGTCCTGTA
CCATTTTATG GAGATATTAA TCCTCCTTGT ATGGGGCCAT CAAAGAGTCT GTTTGATTCA
GGAATCAATT CAATATTGAC AGAACCTAGG CCAGGTAGAG CGACTATCAC AGCTTATGCT
ATTGGTGAGG AAAGTTTTGT GGATTTAAAT GGCAATGGTT TATTTGATAC AAATGAACCA
TTTACTGACA GATCCGAAGC TTTTACTGAT CATAATGAAG ATGGTTATTA CCGGAAAGCT
TCACCTTCCT CATTAGCTGA TTTACCTATT CAACCAGCAG GTTCGGTGAA TGAGGAGTTT
GTTGATTACA ATTTTGATGG CATCTTTAAT AAAGCTGACA ATAAATACAC AGGGCTATTA
TGTGCTTCTG GTTCGAGTGC TGCTTGCACT GACACTGGTT TAGATGATAA TCGAGCTCAA
CTAAATATCT TCAGAAATAT TCCAATTGTT ATGTCTGGTA GTACACCAAT GGTTCGATTA
GTAAAGATTG ATCCAGCTGA TAAAGACACG ATGACAGCAG TAACAGAAAT AGATTTGATT
GACAGAACAG ATCCACTAAA CCCGATAGAA AAAGAGCCTC AAACAGTTTA TCTGTTTGTT
TCTGATGTAA ATAACAATAC ATTACCTTAC GAGACTAAAA TAACGACATC AATAGACAAT
GGAAAGCTCA TAGTCCCTGT GGGAGGGAGT TACTCAATCG CGAGTAATGC ATCTAATAAA
CCGTTAATAT ATGCATTTAC TATTGGTCAA GAAGACCAAG CTAACCAAAA GCTCTCTGGT
GCTCTTGTCA TAACCGTAAA AACACCAAAA GGTTCGCCTG TGAGTGTGAC AGTGAATGTC
AAAGATGGTG GTTAA
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| Protein sequence | MKSAYKVFLA GLCSLFLVAC GGGGSISDDG TGTTPQPSVV TVTLSISNSD NVSLDTPAEV
QATVVDSKTG PKAGIVVTFK LDNDELGTFT PSTGTQLTDS SGVAKIKLET RNLAGAGSVT
ASIVTGESAS IGFYSKGDGA INPGTGNKLK LFLVNAQGQA ITSISTATPG VVKALYTNSS
DEPLVGKVIT FTSTLGKFQP ESGTALTDTQ GLAKIAITAG TVAGAGKIIA KADDTESEAF
GFNTLGDEVV VKPIDAYSIA LTITDSQGQE LRNISHSVPG SVIATLRKDG VPTSYQTISF
NLTGQGTLNP SSGTALTDLN GHASVTLVTG TNAGAGTVTA SFSLENETIT DSFNFEVAGD
APGGNGEANS LSIQLTNSQT GVPTTDISAT QPGKVTVALV DKDSTPLVGK VVSFSSTLGN
FLPTQGTALT DSLGRASITL TAGSIEGAGE ITATYGTAKA IIGFVTAGDE IDPVEASPEI
SFDIYDCNDV ATWDKALKNF EVCKATDNIT NDKPGIVGAK VTRSGSTQAL QQVLITAATT
IGAISPSSGT AITNAEGKAI LDLYANGNVG AGEISLKVKD VTATKAFEIG RVNISLKLET
SLGGNLLPAG GSTILDVTVL NPDGSLATGQ PFTLVFTSEC QASNKAIIDS PVITNGGKGY
ATYRSTGCET QDTVSVSAIT GGGSVSSTAV INIDSIKVGA LQYVTASPTL LALQGTGGIA
GAGARSETSV VTFKLLDETA APAGQERVCF ELSTEVGGIS LSPAPLAQDY LDCPNFPKPN
SPNYPADLSV PNKYAVAVTD SAGLASVIVR SGDRATPVKV FALWAGSSAD GHNGVISNVS
DQLAITTGLA DDDSFSVSAS IFNPEGWDYD NETVDINILA ADHFNNMVPA GTVIVFTAEG
GAIPGSCTTG GLTNPDGACG VQWRSQSPRP FSSTVVQCPV PFYGDINPPC MGPSKSLFDS
GINSILTEPR PGRATITAYA IGEESFVDLN GNGLFDTNEP FTDRSEAFTD HNEDGYYRKA
SPSSLADLPI QPAGSVNEEF VDYNFDGIFN KADNKYTGLL CASGSSAACT DTGLDDNRAQ
LNIFRNIPIV MSGSTPMVRL VKIDPADKDT MTAVTEIDLI DRTDPLNPIE KEPQTVYLFV
SDVNNNTLPY ETKITTSIDN GKLIVPVGGS YSIASNASNK PLIYAFTIGQ EDQANQKLSG
ALVITVKTPK GSPVSVTVNV KDGG
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