Gene Shewana3_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1628 
Symbol 
ID4476592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1916518 
End bp1917093 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID639726211 
ProductYceI family protein 
Protein accessionYP_869267 
Protein GI117920075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.390594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0802652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT GGATAGGAAT CGCGGCATTA TCGACGCTGG TTAGTTTTAG TTGTGCGGCC 
CAGTGGCAAG TGATGGAGCA GGATTCTCGG GTCAGTTTTG TATCGGTAAA AAAGGGTGAT
ATCGCTGAAG TTCACCACTT TAAGCAACTC AATGGTGTAC TTAAAGATAA TGGTCAATTT
GAATTAACCA TTCCTTTGGT CGGCGTGGCA ACTGGTATTG AGGTACGCGA TGAGCGTATG
CAAAACCTGT TGTTTGAGGT GTCCTTGTAT CCCGAGTTGA AATTAAGCTC GCAGGTGGAT
ACCAAGATGC TCAAAGATCT TGCCGTGGGT GAGTCCAAGG TTGCTGACAT CGATGGGAAA
ATTTCCCTCC ATGGCAAACA ACAAACGAAA ACTTTTTCGG TAATTTTAAC CAAAGTATCT
GATAATAAAC TGATGGTTAG CAGTTTTCAG CCGATAATAG TCAATGCTAA CGAATTCGAT
TTGGTCTCGG GTGTGGATAA ATTGCGTGAT ATCGCGGGTT TATCTAGTAT TAGCCAAGCC
GTTCCTGTGT CGTTTGTACT AACCTTAACA AAGTAA
 
Protein sequence
MKKWIGIAAL STLVSFSCAA QWQVMEQDSR VSFVSVKKGD IAEVHHFKQL NGVLKDNGQF 
ELTIPLVGVA TGIEVRDERM QNLLFEVSLY PELKLSSQVD TKMLKDLAVG ESKVADIDGK
ISLHGKQQTK TFSVILTKVS DNKLMVSSFQ PIIVNANEFD LVSGVDKLRD IAGLSSISQA
VPVSFVLTLT K