Gene Shewana3_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1610 
Symbol 
ID4476570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand+ 
Start bp1891758 
End bp1892306 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content48% 
IMG OID639726190 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_869250 
Protein GI117920058 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000877198 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0581343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTTA ACTTACCTAT AGCATTAACC CTTTTTAGGC TTTTTTTACT GCCCATCTTC 
GTGGTGCTCT TTTATCTGCC GTACAGTTGG ACTCCCTTCG TGGCTGCATT TGTGTTTTGG 
CTTGCCGCCA TTACCGATGC CTTGGATGGC TATGCCGCCC GTAAACTCAA GCAACTCACG 
CGTTTTGGGG CTTTTCTCGA TCCCGTTGCC GATAAACTAA TGGTGATCAC CGCGCTGGTG 
TTGCTGGTGG AGCAATATGC CGATATTTGG TTAACGTTGC CGGCACTGTT TATGATTGGT 
CGCGAAATTG TGATTTCAGC CCTACGTGAA TGGATGGCTG AATTAGGTAA GCGCGGGACG 
GTTGCGGTTT CTTGGATCGG CAAATATAAA ACGGCGGCGC AGATGGTGGC GATTATTGGC 
CTGATCTGGC AATACAACCC ACTCATGATC ACCGCGGCAT TTGTGCTGTT ATATATCGCT 
GCCGTGTTAA CCTTCTGGTC AATGATGAGC TACATTTTAG CCGCTTGGAA AGATTTAACG 
GCTGAATAG
 
Protein sequence
MPFNLPIALT LFRLFLLPIF VVLFYLPYSW TPFVAAFVFW LAAITDALDG YAARKLKQLT 
RFGAFLDPVA DKLMVITALV LLVEQYADIW LTLPALFMIG REIVISALRE WMAELGKRGT 
VAVSWIGKYK TAAQMVAIIG LIWQYNPLMI TAAFVLLYIA AVLTFWSMMS YILAAWKDLT 
AE