Gene Shewana3_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1583 
Symbol 
ID4478807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1852270 
End bp1852821 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID639726153 
ProductD,D-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_869223 
Protein GI117920031 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000215349 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.126448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTACAG TCAATCGAGC CGTATTTTTA GACCGTGATG GTGTGATCAA CAAAGATCAT 
GGTTATGTGC ATCAGGTGGA TGACTTTGAA TATATAGAAG GTGTGTTTGA AGCTTGCCTT
GCATTAAAGC AAATGGGATA CAAATTGGTG GTGGTCACCA ATCAGTCGGG GATTGCCCGT
GGCATGTATA CCGAAGATCA ATTCCACAGT CTCACTGAAT GGATGGATTG GAACTTTGCC
GATAAAGGTG TCGACCTCGA TGGTATCTAT TATTGCCCAC ACCATAATGA AAAAGGTCTC
GGTGAATATA AAGTCGATTG CGATTGCCGT AAGCCAAAAC CAGGCATGCT ACTCGATGCG
GCAAAATTCC TGAAAATCGA TTTGTCGCAG TCGGTGATGG TGGGCGATAA AGCAGACGAT
ATGCTTGCGG CCAAAGCGGC AGGGGTGCCG ACACGTATCC TCGTCCGTAC AGGTAAAGCC
ATTGCTGATG ATAGCGAGGC TTCTGTGGTG CTCGATAGCA TTGTCGATGT GCCAGGATTT
TTAAAGAAGT AG
 
Protein sequence
MGTVNRAVFL DRDGVINKDH GYVHQVDDFE YIEGVFEACL ALKQMGYKLV VVTNQSGIAR 
GMYTEDQFHS LTEWMDWNFA DKGVDLDGIY YCPHHNEKGL GEYKVDCDCR KPKPGMLLDA
AKFLKIDLSQ SVMVGDKADD MLAAKAAGVP TRILVRTGKA IADDSEASVV LDSIVDVPGF
LKK