Gene Shewana3_1581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1581 
Symbol 
ID4478805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand- 
Start bp1850125 
End bp1851189 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content49% 
IMG OID639726151 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_869221 
Protein GI117920029 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.040213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.134033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACG CCACTATCAC TGGCTGGGGA AAATGTGTTC CTCCCGCCAC TTTGACTAAC 
GATGATCTTG CTACTTTTAT CGAAACTTCC GATGAATGGA TTAAAAGCCG TACCGGGATC 
AGCCAGCGTC ATATCAGCCA TGTGAATACC TCTGAGTTAG CATCGGTTGC CGCTAAACGC 
GCCCTTGCTG CGGCGGGCAT TGACGGCAGC GAAATTGATA TGATCATTTT AGCCAGCGCC 
AGCCCAGATA CCTTGATCCC GAATATTGCC TCCACAGTAC AGGCGAATAT TGGTGCAAGT 
TGCGCAGCTT TCGATATCAA CGCGGCCTGC AGTGGCTTTT TGTATGGCTT AGGCTTAGCC 
AGCTCACAGA TCAAGAGTGG CCAATGCAAA AAAGTACTAG TAGTCGGTGC AGAGCGTTTA 
TCTTTCTACC TCGATTGGTC ACGCCGTGAA ACCGCAGTAC TGTTTGGTGA TGGCGCGGGC 
GCGGTTGTTG TGGAAGCGAC CGATGTGCCA GGCGGTGTGT TAGGCTATGA GCTGAATAAC 
GACCCTGACG GTCGCGATAT CCTAAAAGCC GGTTTTGGTA CTGCGATGGA TAGATTCTCC 
GCCGAATCCT TAGATTTTTA TATTCAATTC GATGGCCAAG AAATCTTTAA ACGTGCCATC 
AATGGTATGA ATAAGTTAAG CACTCAAGTG CTGGAAAAAT GTGGCGTCGA TAAGGATGAA 
GTCGACTTAG TGATCCCACA CCAAGCGAAC GAGCGCATTA TCGATACCCT CGTTAGCCGC 
ATGAAGATCC CTAAAGAAAA AGCCTTCGTG AACATTGCTA ACTATGGTAA TACCTCTGCG 
GCCACTATTC CCATTGCCAT CTGCGATGCA TTGGAGAAAG GTTTAATTAA GCCAAATCAA 
ACTATTTTGT CATGTGCCTT CGGTGCGGGG TTAACCTCAG CAGCGCTGCT ATTGCAATGG 
GGCGAACGCG TAACACCAGT TCAAGTGAGC GATGCCCAGC TGCCACCTTG CGAGTTGAGT 
GGCATTGAGC TGGTTAAACG TGCAGTGGAT TATTTCTGTA AGTAA
 
Protein sequence
MQYATITGWG KCVPPATLTN DDLATFIETS DEWIKSRTGI SQRHISHVNT SELASVAAKR 
ALAAAGIDGS EIDMIILASA SPDTLIPNIA STVQANIGAS CAAFDINAAC SGFLYGLGLA 
SSQIKSGQCK KVLVVGAERL SFYLDWSRRE TAVLFGDGAG AVVVEATDVP GGVLGYELNN 
DPDGRDILKA GFGTAMDRFS AESLDFYIQF DGQEIFKRAI NGMNKLSTQV LEKCGVDKDE 
VDLVIPHQAN ERIIDTLVSR MKIPKEKAFV NIANYGNTSA ATIPIAICDA LEKGLIKPNQ 
TILSCAFGAG LTSAALLLQW GERVTPVQVS DAQLPPCELS GIELVKRAVD YFCK