| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1539 |
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| Symbol | |
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| ID | 4477435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1794542 |
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| End bp | 1797043 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639726109 |
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| Product | hypothetical protein |
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| Protein accession | YP_869179 |
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| Protein GI | 117919987 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00274903 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGCTTA ATTTGGCATG GCGCCTGTTT AAGCGAGAGC TGCAACAGGG GCAGTTGTTA
TTGATTATCC TCGCGATTAC CTTGGCGGTG CTGTCGGTCA GTGGTCTAGC GCGAGTCAGC
GAGCGCTTGC AGGTCGCGAT AAACGGGCAA GCGACTCAGT TTATCGCCGC CGATCGTATT
ATCGATTCTC CCGTTCAAAT TGATGCCAGC ATTCTGGCCA AGGCCGACGA GCTTGGTCTT
AAGCATGTGA CCAATATGCA ATTTAACTCC ATGGTGTATG CGGGGGATAA GTTTCAGTTA
GTCACAGTGC GGGCGGTTGA GTCTGGTTAT CCACTTAAGG GCGACATAAA ACTTAAAGCG
GCCAATGGCC AAGATGAAAA AGCTCAAGGC TTGCCCCACG CCGATGAGGT GTGGTTTGAG
AGTCGCTTAG GGGGACTCTT GGGATACCCG CAAACCTTGG AGCTAGGCAA CAGTGAGTTT
CGTTTAAGTC AAGAAATCAG CCGCTTACCC GATGCGGGTT TTAATCCATT CGCTTCTTCC
CCCGTGGTGT TAATGCGGAT TGAAGATGTC GCCAAGACTG GGGTTATTCA ACCCGGCAGC
CGAGTGACTT ATCTGTATCA GTTTGTGGGT GAAGAAAGCG CCTTAAGCGC CTTTGAGAAT
AGCGTTAAAC CGCTGCTGAA TAATTCCCAG CGCTGGGTCG ATGTGCAGTC TGGCGACTCA
CCGATAGCGG GCGCGGTGAA GCGGGCGGAG CGTTTTTTAC TGCTGGCAAG CTTGCTCGGT
ATTGCGCTGG CCTGCGCCGC GATTGGGATT GCCGCCCAGC GTTACTGCCA ACGTCATTAT
GATGTGGTGG CTATGCTTAA AACCTTTGGC GCCTCATCAA CTCAAATTCG TCGACTATTC
GGTATCCATT TACTGCTAGT GACACTATTT GGCATTGTGC TGGGGTTAAT CGGCGGGGCA
CTGCTGGATT TAGGCATTAA TCAACTGTTA CCCCCTGAAA TCGCCGCCTA TTCGCCGCCG
TTGACTCGGC CGCTACTGCT TGGGATCAGC ACTGGGCTTA TCAGCGCCTT TATGTTTTCG
GCCTATCCTT TAATGCGTCT GCTGGCGATT CCGCCACTGC GGGTCTTACA AAGACAGCTC
GAAGGTTTGC AGCTCGGCAT GTGGCTGCAT TTACTCCTCA GTTTAGGGGC GATGGCACTG
TTGGGATATT TGTATTCCCA AAGCTGGGCG CTGACACTCA CAGTAGTTGC GGCTGTGCTG
CTACTGGGCG TATTGCTCAG TATTTTAGGC TTTGTGATGA TCCGCCTTGG TCACAGTGTC
GGCATGAAAA CCACCAATCC CTTGCAACTG GCACTCGCGG GTTTACGCCG CCGCGCGCGG
CAAAATGCGG TGCAATTGGT GGGCTTTAGT GCGGCCTTGG TATTACTACT GACCATTTTG
GCTCTGAGGC AAGATTTACT GAACGAGTGG CAAAAACAGC TGCCCGAGAA TGCACCCAAC
TATTTCTTGG TCAATATCGC CCCCGATGAT GCTAAGCCAT TAAATGACTT TATGGCGCAA
AAAGGCATAG CAGCCACGGA TATCTATCCC GTGATTCGCG GCCGCTTGAC TCAAATCAAT
GGTGAAACCT TGATTTCCGA CGAGCAGGCC GAGGCGGGGG AGAAGGGGCG AGTAGGGATC
TCCCGCGAGC TTAATCTCAC CTGGCGCAAT ACCTTGCCCG CCAACAACGA GTTGGTCGAA
GGGCATTTTA ATCAGGCGGC GGATGAGGTT TCTGTCGAGT CAGGTGTTGC CGAGCGTTTA
GGGCTAAAGC TGGGCGATAC GCTGACCTAT ATGATTGATA ACCAAGAGCT TAAGGTCAAG
GTAGCCAGTA TCCGTGCCGT GCACTGGGAA ACTATGCAGC CAAACTTCTT TATGATCTTC
ACTCAAGAAG CGCTGGCGCC CTTTGCCTAT ACCTCGATGG CAAGCTTCTA CCTCGACGAC
AAAAAAACGG ATGTGCAAGG GAGTGATGCT CCGAAGAGCA CAGTGATCCT CGAACTTATC
CAGCAGTTCC CAACGGTGTC GATTATCGAT GTCGGCGCTA TGGTAGGGCA ATTGCGGCAG
ATTATTGAGC AGGTGTCCCT GTCGCTGACG TTGGTTTTGG TTCTCGTCTT ACTGGCCAGT
TCTTTAGTGC TTATCGCGCA AACTGAGGCG GGAATGGCGA CACGCCAGCG TGAACTCGCA
GTGCTGCGCA CCTTTGGCGC TTCTGGCTGG TTACTGCGAA GTGCCACTGG GCTTGAATTT
GCGTTACTGG GGGGCATAGC TGGGGTGCTT GCAGTGATAG TGGCGGAATT TGCCCTGTAT
CTGTTAAAGA CCCAAGTATT TGAACTCAAT GTGTATATGC ACTGGCCCTG GTGGGGGATT
GCCCCTGTCT GCGGTGCCTT GTTAGTTGCG CTGCTGGGTG TTTGGCGCTG CCGCCAATTG
CTCAATCAAT CCTGCGCCGA ATTATTAAAA GCGGGCGCTT AA
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| Protein sequence | MELNLAWRLF KRELQQGQLL LIILAITLAV LSVSGLARVS ERLQVAINGQ ATQFIAADRI
IDSPVQIDAS ILAKADELGL KHVTNMQFNS MVYAGDKFQL VTVRAVESGY PLKGDIKLKA
ANGQDEKAQG LPHADEVWFE SRLGGLLGYP QTLELGNSEF RLSQEISRLP DAGFNPFASS
PVVLMRIEDV AKTGVIQPGS RVTYLYQFVG EESALSAFEN SVKPLLNNSQ RWVDVQSGDS
PIAGAVKRAE RFLLLASLLG IALACAAIGI AAQRYCQRHY DVVAMLKTFG ASSTQIRRLF
GIHLLLVTLF GIVLGLIGGA LLDLGINQLL PPEIAAYSPP LTRPLLLGIS TGLISAFMFS
AYPLMRLLAI PPLRVLQRQL EGLQLGMWLH LLLSLGAMAL LGYLYSQSWA LTLTVVAAVL
LLGVLLSILG FVMIRLGHSV GMKTTNPLQL ALAGLRRRAR QNAVQLVGFS AALVLLLTIL
ALRQDLLNEW QKQLPENAPN YFLVNIAPDD AKPLNDFMAQ KGIAATDIYP VIRGRLTQIN
GETLISDEQA EAGEKGRVGI SRELNLTWRN TLPANNELVE GHFNQAADEV SVESGVAERL
GLKLGDTLTY MIDNQELKVK VASIRAVHWE TMQPNFFMIF TQEALAPFAY TSMASFYLDD
KKTDVQGSDA PKSTVILELI QQFPTVSIID VGAMVGQLRQ IIEQVSLSLT LVLVLVLLAS
SLVLIAQTEA GMATRQRELA VLRTFGASGW LLRSATGLEF ALLGGIAGVL AVIVAEFALY
LLKTQVFELN VYMHWPWWGI APVCGALLVA LLGVWRCRQL LNQSCAELLK AGA
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