| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1525 |
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| Symbol | |
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| ID | 4477421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1775428 |
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| End bp | 1776303 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639726095 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_869165 |
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| Protein GI | 117919973 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00489615 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGAAA AATTGCAGAA AGTCTTGGCC CGTGCAGGCC ATGGCTCCCG TCGTGAGATG
GAGGCATGGA TTGCTGCAGG CCGAGTTAGT ATTGATGGCG TGATTGCCAA TCTTGGCGAC
CGTATCGAAG CCGATGCGAA GGTTCGTATC GATGGTAGAG CCGTATCGCT TAAGTCCGCT
GACGATGTGA TTTGCCGCGT ACTCGCCTAT CACAAACCCG AAGGTGAGAT TTGTAGCCGT
AAAGACCCTG AAGGTCGTCC AACCGTGTTT GACCGTTTGC CGAAAGTGCG TGACTCCCGT
TGGGTTGCGG TCGGCCGTCT GGATATCAAC ACTTCAGGCT TATTGCTGTT TACCTCAGAT
GGTGAATTAG CAAACCGTTT GATGCACCCT TCTAACGAAG TTGAACGTGA ATACGCAGTA
CGTACCTTTG GTGAGGTGCC TGAGGCTGCG GTACAACGTC TGCGTACCGG CGTAATGTTA
GAAGACGGCA TGGCGCAGTT CGATGCCATC AAAGCCGCAG GCGGCGAGGG CATGAACCAA
TGGTGGCACG TATGTTTACG TGAAGGCCGC AACCGCGAAG TGCGTCGTTT ATGGGAATCC
CAAGAGGTGC AAGTTAGCCG TCTGATCCGT GTGCGTTACG GTATGGTGGA ATTGCCTAAA
TCTCTGCCTC GTGGTGGCTG GGTTGAATTG CCTATTGAGC AAGTTAACTA CCTGCGCCAA
TTAGCGGGTC TTGAACCTGA AACTCGCACT ATGCTGGCCG CCGATAAACA CAGCGTGGCC
CGTGCTCAGG TAAAGAGTGC TAAAATTCGC CGCGCCGTAC GCAAGCATAA AGTGACTGCG
ACGCCTAAGG CTAAGCCAAC ACGTCAGCGT AGTTAA
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| Protein sequence | MSEKLQKVLA RAGHGSRREM EAWIAAGRVS IDGVIANLGD RIEADAKVRI DGRAVSLKSA
DDVICRVLAY HKPEGEICSR KDPEGRPTVF DRLPKVRDSR WVAVGRLDIN TSGLLLFTSD
GELANRLMHP SNEVEREYAV RTFGEVPEAA VQRLRTGVML EDGMAQFDAI KAAGGEGMNQ
WWHVCLREGR NREVRRLWES QEVQVSRLIR VRYGMVELPK SLPRGGWVEL PIEQVNYLRQ
LAGLEPETRT MLAADKHSVA RAQVKSAKIR RAVRKHKVTA TPKAKPTRQR S
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