| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1524 |
|---|
| Symbol | |
|---|
| ID | 4477420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1774839 |
|---|
| End bp | 1775435 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639726094 |
|---|
| Product | condensin subunit ScpB |
|---|
| Protein accession | YP_869164 |
|---|
| Protein GI | 117919972 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00434208 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATAA ATCCAATTCA ATTAAAACAG CTTATTGAAG CGAGTCTGTT TGTATTGGGG
AAACCCTTGT CGGTGAAAAT GTTGAAAGAA ACCGTGTTGG CGGATTTCAG TGTTTCCAGA
GACAAAATCA AAGCCGCATT GGAAGAGCTG CAGCAGGATT ATCAGGAACG GGGTGTTCAA
CTTGTGAAAG TGGCTGGAGG TTATCGCTTC CAGACCTTGG AAGTCCTGAG TCCTTTTTTG
CAACCCCTGT GGCAGGAAAA AGCACCTAAG TATTCGCGGG CAACATTAGA GACCTTGGCG
GTGATCGCCT ATCGTCAACC CGTGACCCGT GGTGATATTG AGCAGGTGCG AGGTGTGGCC
ATTAGTAGCC ATATCATTAA AAGTTTGTCA GATAGACATT GGATTAAAGT CGTTGGCCAT
AAAGAAGTCC CGGGGCGACC CGCACTCTAC GCCACGACCT TAGAATTTTT AGCCTATTTT
GGCTTAGATA CCCTAGCGGA TTTACCTGCG CTTACGGATA CTGAGTCATT GCAGGCGGTA
TTTTCAGGTT TGAAAGTAAC GCCTGAACAG TCAGAAGAGC AAGATACTAA TGAGTGA
|
|---|
| Protein sequence | MQINPIQLKQ LIEASLFVLG KPLSVKMLKE TVLADFSVSR DKIKAALEEL QQDYQERGVQ
LVKVAGGYRF QTLEVLSPFL QPLWQEKAPK YSRATLETLA VIAYRQPVTR GDIEQVRGVA
ISSHIIKSLS DRHWIKVVGH KEVPGRPALY ATTLEFLAYF GLDTLADLPA LTDTESLQAV
FSGLKVTPEQ SEEQDTNE
|
|---|
| |