Gene Shewana3_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1456 
Symbol 
ID4479673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1689279 
End bp1690295 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content51% 
IMG OID639726026 
Productvon Willebrand factor, type A 
Protein accessionYP_869096 
Protein GI117919904 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000144994 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTAACAG TCGCATGGCC TTTGGCATTG ATTTTACTGC CTTTACCTTT TATTTTTTGG 
CGTCGCCAAA CGGTGCAAGC CGAAGGTGGC CGCCTGCAAT TGCCCGGTAT TAGTCAAACG
GACAAGGCCA ATATCACTAG CCACAGCCGC CAAAGCCGCA AACGTTATTG GTTGATGTGG
AGCTTGTTAG TGCTTGCTAT CGCCCGCCCA CAATGGCTCG GCGATCCGAT TGAACTACCA
AGCCAAGGGC GGGATCTGAT GCTGGCGGTG GATTTATCCG GCAGTATGCA GATTGAAGAT
ATGGTGATTA ACGGCAAAGT GGTCGACCGT TTTACCCTGA TCCAACACGT GGTCAGTGAG
TTTATTGAGC GTCGCAAAGG TGATCGTATC GGTTTGATTT TATTTGCCGA TCACGCCTAT
CTACAGGCAC CACTCACCCA AGATAGACGC TCTGTCGCCC AGTTTTTAAA GGAGGCGCAG
ATTGGCCTTG TCGGTAAACA AACGGCGATC GGCGAGTCGA TTGCGCTCGC GGTCAAGCGC
TTCGACAAAA TGGATGAGAG TAACAGAGTC TTGATTTTAT TGACTGACGG TTCAAATAAC
GCCGGTAATA TCGAGCCTGA GCAAGCGGCA CAAATCGCCG CTAATCGCAA AGTGACGATT
TATACCGTGG GCGTGGGTGC CGATGTTATG GAAAGACGCA CCCTGTTTGG TCGTGAGCGC
GTCAATCCGT CGATGGATCT CGATGAAAAC CAACTCAAGC ATATTGCCGA TGTTACCCAT
GGCCGCTATT TCCGCGCCCG TAACAGTCAA GAGCTGGAAC AGATTTATCA AGAAATAGAC
AAACTGGAGC CCGTGAGTCG CGATCAACTC AGCTATCGTC CTCAAGCGGA ACTATTCTAT
TGGCCGCTCG CCCTCGCGCT GCTCACCAGC ATTTGGATAG CCTTAGGTCA GTTATCACTG
TTTTCGCGGA CTAAAAACCC TGTTCCATCT GCAACACCAC GGGGGGATGT TCGTTAA
 
Protein sequence
MLTVAWPLAL ILLPLPFIFW RRQTVQAEGG RLQLPGISQT DKANITSHSR QSRKRYWLMW 
SLLVLAIARP QWLGDPIELP SQGRDLMLAV DLSGSMQIED MVINGKVVDR FTLIQHVVSE
FIERRKGDRI GLILFADHAY LQAPLTQDRR SVAQFLKEAQ IGLVGKQTAI GESIALAVKR
FDKMDESNRV LILLTDGSNN AGNIEPEQAA QIAANRKVTI YTVGVGADVM ERRTLFGRER
VNPSMDLDEN QLKHIADVTH GRYFRARNSQ ELEQIYQEID KLEPVSRDQL SYRPQAELFY
WPLALALLTS IWIALGQLSL FSRTKNPVPS ATPRGDVR