| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1455 |
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| Symbol | |
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| ID | 4479672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1687207 |
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| End bp | 1689279 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639726025 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_869095 |
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| Protein GI | 117919903 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4372] Uncharacterized protein conserved in bacteria with the myosin-like domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000112359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCCTGC ATTTTATTCG TCCAGAATGG TTACTCGCCC TGTTGCCACT CGCCATCATC
CTGTGGGCGC TGTGGCGCCA ACACCAGAGT AATAGCGCCT GGAACCGTTA TATTGCGCCG
CACTTGGCCA AAATATTGGT TACAGAGGGC ACGCAAAAAT CCCGTCGACC ATTGCATATC
TTGGCTTTCA CTTGGGTGAT TGCCACCTTG GCCTTAGCTG GCCCAGCGCT CAATAAGCAA
ACCTTGCCGG TTTTTGCCGC CGAGCAAGGC CGAGTGTTGG TGATGGATAT GTCCGTTTCC
ATGTTTGCCA CCGATCTGGC ACCCAACCGC TTAACCCAAA CCAAGTTTCG GGCGACGGAT
TTGCTCCGCG GCTTAAAAGA AGGCGAAACT GGCCTGATTG CCTTCGCCGG CGATGCCTTT
ACCATAAGCC CGCTCACCCG AGACACGGGC ACGCTGCTTA ATTTATTACC CACTTTAAGC
CCTGACATTA TGCCCGTGTT GGGCTCAAAC CTAGCGGCCG CGCTAACCCA AGCCAAAAAT
TTACTGGCGC AGGGCGGGCA TCTACGGGGC GATATTATTG TGATGACAGA TGGCATCACC
CCGAGGCAAT TCGATGAGGC TAACTCGGCC TTAGCCGGTA GCCAATATCG GCTCGCGATC
ATGGGATTTG GTAGCCCACA AGGCGCGCCA ATCCGCTTAC CCGATGGCCA ATTACAGCGG
GACAGCAGCA ATGAAGTCGT TGTCGCCAAA ACCGACTTTG GCTTGCTGCA AAAATTAGCC
GATAACCATA ATGGCATCAT GATCCCCAAT CGGGCCGATG GTCAGGATTT AGTGCAGTTG
CAACATTGGT TAAGCGACAG TGGCGATGCC AAAGCCACGG ATCTCGATGG GGAAACCTGG
CAGGATCTCG GTCCTTACCT CGCCTTACTC TTACTCATCC CTGCCCTGCT GAGCTTTAGG
CAAGGCATGC TCGCCAACTG GCTGCTGATG GGATTAGCTG GCCTATTGAT CGGTGCTGCG
CCGCAGAATG CCCATGCCAG TGCATGGGAC TCGCTCTGGC ACACCAAAGA TCAACAGGCG
ATGCAGGCCT ATCAAGCCGA AGATTACGCC AATGCCGCTC AAAAATTCGA AACGCCACAA
TGGCAAGGCG CAGCGCAGTA CAAGGCCGGC GAGTACGAAC AGGCGCTAAA AAACTTTGAG
CAAGATAGCT CTGCTAATGG CCTGTACAAT CAAGGCAACG CGCTGATGCA ACTTGGTAAA
CCCGATAAAG CCAAGGAGCG TTATCAGGCC GCACTCGACA AGCAGCCCGA TTTTCCACAG
GCCAAAGCCA ACCTTGAGTT AGCAGAGAAA TTGCTGAACC AGCAACAATC GCAGCAAAAT
GCTGACAATC AAGAGAAGCA GTCTCAAGGC GATGAAAACC AACAGGGACA GAATCAGAAC
GATCAGCAGC AGGGACAAAA CCAGCAGCAG GGTCAGCAGG GAGATCAACA ATCCTCGCAA
AACGACCAAG CTCAAGATCA GTCTCAAGAG CAGCAGTCCC AACAGCAAAA TAATCCTGAC
CAAGCGGACG AAAAACCGTC GCAGGAGCAA GAGTCTTCAT CCGAGCAGAG TAATCTTGAG
CAAGGCGCAC AGGATAAACA GCAAGCGAGT GATGATAAGG CCAAGCAAGA TCAGCAAGAT
GCACAGCAGG AACAACAGCA GGCCGAGCAA CAAGCCAATC AGCAAAACCG CGCCGATAAC
AATGCAGAAG ATAAAGAAGA GCAAGCCAGC AACGAGGCCA AAATGCAGGC ACAGGTCGAG
GATGATAAGT CCAAAGCCGA GCAAGAACAG CAACAGGCCG TAGCGCAAAA AGCGGATAAA
GAGAAACAGT CACAGGCGGA TAAAAACCCA GATACCGCAA TTGAGTCTGT TGAAGCGCCG
CCGAGCAACA GCGAGCCTTT GCCCGCGGAG ATGCAGCGAG CACTGCGGGG CGTGAGTGAA
GATCCACAGG TGTTACTGCG TAACAAGATG CAACTCGAAT ATCAAAAACG CCGTCAAAAT
GGCCAAATAT CAAGGGATAA CGAACAGTGG TGA
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| Protein sequence | MSLHFIRPEW LLALLPLAII LWALWRQHQS NSAWNRYIAP HLAKILVTEG TQKSRRPLHI
LAFTWVIATL ALAGPALNKQ TLPVFAAEQG RVLVMDMSVS MFATDLAPNR LTQTKFRATD
LLRGLKEGET GLIAFAGDAF TISPLTRDTG TLLNLLPTLS PDIMPVLGSN LAAALTQAKN
LLAQGGHLRG DIIVMTDGIT PRQFDEANSA LAGSQYRLAI MGFGSPQGAP IRLPDGQLQR
DSSNEVVVAK TDFGLLQKLA DNHNGIMIPN RADGQDLVQL QHWLSDSGDA KATDLDGETW
QDLGPYLALL LLIPALLSFR QGMLANWLLM GLAGLLIGAA PQNAHASAWD SLWHTKDQQA
MQAYQAEDYA NAAQKFETPQ WQGAAQYKAG EYEQALKNFE QDSSANGLYN QGNALMQLGK
PDKAKERYQA ALDKQPDFPQ AKANLELAEK LLNQQQSQQN ADNQEKQSQG DENQQGQNQN
DQQQGQNQQQ GQQGDQQSSQ NDQAQDQSQE QQSQQQNNPD QADEKPSQEQ ESSSEQSNLE
QGAQDKQQAS DDKAKQDQQD AQQEQQQAEQ QANQQNRADN NAEDKEEQAS NEAKMQAQVE
DDKSKAEQEQ QQAVAQKADK EKQSQADKNP DTAIESVEAP PSNSEPLPAE MQRALRGVSE
DPQVLLRNKM QLEYQKRRQN GQISRDNEQW
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