| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1435 |
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| Symbol | tgt |
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| ID | 4479652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1664297 |
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| End bp | 1665421 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639726005 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_869075 |
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| Protein GI | 117919883 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000652098 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000858372 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AACTCGACAC TACCGACGGC CGTGCGCGCC GTGGTCGCTT GATTTTTGAA
CGCGGCACGG TGGAAACCCC AGCCTTTATG CCTGTTGGTA CTTACGGCAC GGTAAAAGGC
ATGACGCCTG AAGAAGTGCG TGCTACTGGT GCGGACATTC TGCTCGGTAA CACTTTCCAC
CTGTGGTTAC GTCCAGGCGA AGAAATCATG CGTAAGCATG GTGACTTGCA CGATTTTATG
AACTGGCAGC GTCCTATTCT GACCGATTCG GGCGGTTTCC AAGTGTTCAG TTTGGGTGAC
ATTCGTAAAA TTACCGAAGA AGGTGTGCAT TTCCGTTCGC CAATTAATGG CGAGAAAATC
TTCTTAGATC CTGAAAAATC AATGCAAATT CAACATGCAT TGGGCAGTGA TGTGGTGATG
ATTTTTGACG AATGTACTCC GTATCCGGCG ACAGAAGATG AAGCGCGCAA GTCAATGCAG
ATGTCACTGC GTTGGGCTAA GCGTTCACGC GACGAGTTCG ACCGTCTGGA AAACCCCAAT
TCATTATTCG GGATCATCCA AGGCAGTGTT TATGAAGATT TACGCGACGA GAGCTTAAAA
GGCTTAGTCG AAATTGGTTT CGACGGTTAT GCCGTCGGTG GTTTGGCCGT AGGTGAGCCT
AAGGAAGACA TGCACCGCAT TCTTGAGCAT GTCTGTCCAC AAATTCCTGC GGACAAGCCT
CGCTATCTGA TGGGGGTCGG TAAGCCAGAG GATTTAGTAG AAGGTGTGCG TCGTGGTATC
GACATGTTTG ACTGTGTGAT GCCAACCCGT AACGCCCGTA ACGGTCATCT GTTTACCAGT
GAAGGTGTGA TTAAGATCCG CAATGCGCGT CATCGTGATG ACACTTCACC GCTCGATCCT
AAGTGTGATT GTTATACCTG TAAAAACTAT TCACGGGCAT ACCTTTACCA TTTAGATCGT
TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG
TTAATGGAAG GTTTGCGCGG GGCGATTGAG ACGGGTACAT TAGACGCCTT TGTAAAGGAC
TTCTATACCA GTCAAGGTCG TGAAGTACCA GAGTTAGTCG ATTGA
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| Protein sequence | MKFELDTTDG RARRGRLIFE RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH
LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI
FLDPEKSMQI QHALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWAKRSR DEFDRLENPN
SLFGIIQGSV YEDLRDESLK GLVEIGFDGY AVGGLAVGEP KEDMHRILEH VCPQIPADKP
RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDP
KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVKD
FYTSQGREVP ELVD
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