Gene Shewana3_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1410 
Symbol 
ID4479007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1631379 
End bp1631957 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content45% 
IMG OID639725965 
Productthymidine kinase 
Protein accessionYP_869050 
Protein GI117919858 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.68463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCAAT TGTATTTTTA CTATTCAGCA ATGAATGCGG GTAAATCCAC CTCTCTATTA 
CAATCTTCCT ATAACTACCG CGAGCGCGGC ATGAATACCC TAGTGATGAC GGCCTCTATC
GACGACAGAT ACGGTAAAGG TAAGGTGGCA TCACGTATTG GTATTGAAAC CGATGCCCAG
GTATTTAGCA GCCACGACAA TCTGATAGAC ATGATCACCA CGGCGCACCA ACAGAATCAT
TTGAGCTGTG TGCTGGTGGA CGAGTGCCAA TTCTTAAGCA AAGAGCAAGT TAAACAACTT
ACTTATGTTG TTGATAAAAT TGATATCCCA GTTTTGTGCT ATGGTTTACG TACCGACTTC
CAAGGTGAAC TCTTCACTGG CAGTCATTAT TTGTTGGCAT GGGCCGATAA GTTAGTCGAG
CTGAAAACCA TTTGTCACTG TGGACGCAAA GCCAATATGG TGGTGCGTCT TGATGGTGAA
GGTAAAGTGA TGCGCGAAGG TGAGCAGGTG GCAATCGGCG GTAATGAAAG TTACGAATCG
GTTTGCCGTA AGCATTTTCG TGAGTTTATT TGGGATTGA
 
Protein sequence
MAQLYFYYSA MNAGKSTSLL QSSYNYRERG MNTLVMTASI DDRYGKGKVA SRIGIETDAQ 
VFSSHDNLID MITTAHQQNH LSCVLVDECQ FLSKEQVKQL TYVVDKIDIP VLCYGLRTDF
QGELFTGSHY LLAWADKLVE LKTICHCGRK ANMVVRLDGE GKVMREGEQV AIGGNESYES
VCRKHFREFI WD