Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1399 |
Symbol | |
ID | 4478996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1615512 |
End bp | 1616141 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725954 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_869039 |
Protein GI | 117919847 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.272877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACGC TAAACACAAC CGCATTGCCT GATTATCAGA GCCAACACAA AAAGCGTCTG TCTTGGATGC CCTGGCTGTA TTTTTCACTC AAAGAAAAAC ACTTAGTCTG GGCTAAACCT TGGCAGGATG AAATTCAAAC CAACCTTTGC GCCCTCGAAA CCGTCACCAT TGGTGATAAC TGTTTTATCG CCCCCGAGGC ACAATTATTT GCTGAGCCCA ATCGCGATAT CAAGATAGGT AATCATTGCA TGATTGCCGC CGAATGTTTT TTACATGGCC CTATTACCCT TGGTAACGAA GTCGCCATCA ATCATGGCTG CTCCTTCGAT GGCGGTCGAG TGGGGATTCA AATTGGCTCC CAAACTCGCA TTGCTAATCA TGTCACTATC TATGCCTTTA ATCATGGCAT GGCGCCCGAT ACGCCCATTT ATCAACAAGC CTCCCACTCT AAAGGCGTCG TGATAGGTAA AGATGTTTGG ATTGGCGCAC AGGCCGGGAT AGTTGATGGT GTCACCATTG GCGACCATGC GGTGATTGGC ATGGGCTGTA TTGTCACCAA AGATGTCCCC GCATGGGCTA TCGTCGCCGG TAATCCTGCA CGGGTGATTG GCGATCGGCG AAATAAGTAA
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Protein sequence | MQTLNTTALP DYQSQHKKRL SWMPWLYFSL KEKHLVWAKP WQDEIQTNLC ALETVTIGDN CFIAPEAQLF AEPNRDIKIG NHCMIAAECF LHGPITLGNE VAINHGCSFD GGRVGIQIGS QTRIANHVTI YAFNHGMAPD TPIYQQASHS KGVVIGKDVW IGAQAGIVDG VTIGDHAVIG MGCIVTKDVP AWAIVAGNPA RVIGDRRNK
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