Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1339 |
Symbol | |
ID | 4478853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1551942 |
End bp | 1553024 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725894 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_868979 |
Protein GI | 117919787 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.400038 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTC ATCCACTAGC GCAAATTGAA ACATTCAAGC ACACTAGCAA ACAATGGAAC CAACTGCGTG AGGCCGCCAA TATGTCCAAT CGGATGGAGC ATATTTTACA GGCTATGCCC TCTGGCGTGG TGATTTTGAA CGGTGATGGT ATTGTCACTG ATGCAAACCC CGTTGCCGTC GAATTGCTGG AGCAGTCGTT ATGCGGCGCC CGCTGGATTG ATGTGATCCA TACGGCGTTT GCGCCACAGG ACGATGATGG CCATGAAGTC TCATTACGCA ATGGCCGCCG AGTCAAATTT GCGATTACCC CATTAACGCC GGAACCTGGC CAATTAATTG TGCTGACGGA TCTGACCGAA ACTCGTCTAC TGCAAAAGAA TCTTTCCCAT CTGCAGCGCC TGTCAGCCCT CGGCAAAATG GTCGCGACGC TGGCGCATCA GGTGCGGACT CCACTGTCGG CTGCACTGCT CTATGCTGCT AATCTGGCCA GTCCCAAATT ATCGGAATCT GCTAAGGCAA AATTTCAGCA GAAATTAGTG GATAGACTCA ATGAGCTTGA ACGCCAAGTG AACGATATGC TGCTGATGGC CAAAGGACGT CAAGATGAGC TGGGCGAACT GATTAATCTT AATGATGTTA TCGAGAATGT TGTTGCTAAC TGTGAACCAA TAGTTGCTAA GCATGGCGCT GAACTGGCGG TAACCAATAT TTCTAATAGC TTAATGCTGG CGAATGTGAA TGCGCTCAGT TCAGCCGTCA ATAACCTCGT GATGAACAGT CTTGAAGCCG GGGCTACGCA GATCCAAATC GTTGCTAGTG ATAGCAATGA ACAGTTACAT CTCAATGTTA TCGATAATGG CAAAGGATTG GATGCCAAAA TGCAGCAAAA AGTGTTGGAA CCTTTCTTTA CCACTAAAGC TCAGGGGACT GGTTTAGGCT TAGCCGTTGT ACAGTCTGTG GTGCGTAATC ATGGCGGCCA ACTGCAATTA AGCTGCATGC CCAATAAGGG TTGTACTGTG TCGCTAACCT TCCCGCAGGC GAAATCGGCT GCTGTATTGC CGCTGGAGAA ACCCTATGTC TGA
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Protein sequence | MSAHPLAQIE TFKHTSKQWN QLREAANMSN RMEHILQAMP SGVVILNGDG IVTDANPVAV ELLEQSLCGA RWIDVIHTAF APQDDDGHEV SLRNGRRVKF AITPLTPEPG QLIVLTDLTE TRLLQKNLSH LQRLSALGKM VATLAHQVRT PLSAALLYAA NLASPKLSES AKAKFQQKLV DRLNELERQV NDMLLMAKGR QDELGELINL NDVIENVVAN CEPIVAKHGA ELAVTNISNS LMLANVNALS SAVNNLVMNS LEAGATQIQI VASDSNEQLH LNVIDNGKGL DAKMQQKVLE PFFTTKAQGT GLGLAVVQSV VRNHGGQLQL SCMPNKGCTV SLTFPQAKSA AVLPLEKPYV
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