Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1338 |
Symbol | |
ID | 4478852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1550400 |
End bp | 1551833 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639725893 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_868978 |
Protein GI | 117919786 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0526886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.316977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAAA CAGATCAACG AATTTTACTT GTCGGAACCC CATCAGAGCG CTTAAGTCGC CTGTGTTGCA TTTTTGAATT TTTGGGTGAG CAGATTGAAA TCGTCGCCAT CGAAAAGTTA AGTCTTTGTC TGCAAGATAC CCGGTTCCGC GCTTTAGTGG TCACTGCTGA TAACATGCCA GCTGATGCTC TCAAGTCACT TGCGAGTCAG TACCCATGGC AACCCATTTT GTTATTTGGC AATGTAGATG ATCTGCAAGT GTCGAATGTA CTGGGTCACA TTGAAGAGCC ATTAAACTAC CCACAACTAA CCGAACTCCT GCATTTTTGT CAGGTTTATG GGCAAGTCAA ACGTCCACAA GTCCCAACCA GTGCAAATCA AACCAAACTG TTTCGTAGCT TAGTGGGTCG TAGTGAAGGC ATTGCCAATG TGCGTCACTT GATTAGCCAA GTCGCCACCT CTGATGCCAC TGTATTAGTC CTGGGTCAGT CGGGGACGGG TAAGGAAGTG GTTGCTCGGA ACATTCATTA TTTATCTGAG CGCCGAGATG GTCCTTTTAT TCCGGTTAAC TGTGGCGCGA TTCCGCCTGA GTTATTGGAG AGTGAATTAT TTGGCCATGA AAAGGGCTCT TTTACTGGGG CAATTAGTTC TCGTAAGGGC CGTTTCGAAC TTGCCGAAGG TGGCACGCTG TTCCTCGATG AAATTGGCGA TATGCCTTTG CAAATGCAGG TAAAATTGCT GCGCGTGTTG CAAGAACGTG TCTTTGAGCG TGTTGGGGGA ACTAAAACGA TTAATGCTGA TGTACGTGTC GTAGCGGCAA CCCATAGGGA TCTTGAAACT ATGATCAGCA GCAATGAGTT CCGTGAAGAT CTTTATTACC GCCTTAACGT CTTCCCGATC GAAATGCCAG CATTAAGTGA GCGTAAGGAT GATGTTCCTT TACTGCTGCA AGAGTTAGTG AGTCGTGTCT ATAACGAGGG ACGTGGCAAA GTTCGTTTTA CTCAGCGTGC TATTGAATCG TTAAAAGAAC ATGCTTGGTC AGGTAACGTT CGAGAATTAT CTAACTTAGT TGAGCGCCTC ACAATCTTGT ATCCAGGTGG CTTAGTTGAT GTTAACGATC TGCCTGTTAA ATATCGCCAC ATTGATGTGC CAGAATACTG TGTTGAAATG AGTGAAGAGC AACAGGAGCG TGATGCGCTC GCTTCGATTT TCACCAGCGA AGAGCCAGTT GAAATTCCTG AAACGCGTTT CCCCAGTGAG TTACCACCTG AAGGCGTTAA CCTCAAGGAT CTGCTGGCAG AGCTTGAAAT CGATATGATT CGCCAGGCGT TAGAGCTGCA GGATAACGTC GTTGCGCGTG CTGCAGAAAT GCTCGGTATT CGCCGTACTA CCTTGGTTGA GAAAATGCGT AAGTACGGAA TGACGAAAGA ATAG
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Protein sequence | MMQTDQRILL VGTPSERLSR LCCIFEFLGE QIEIVAIEKL SLCLQDTRFR ALVVTADNMP ADALKSLASQ YPWQPILLFG NVDDLQVSNV LGHIEEPLNY PQLTELLHFC QVYGQVKRPQ VPTSANQTKL FRSLVGRSEG IANVRHLISQ VATSDATVLV LGQSGTGKEV VARNIHYLSE RRDGPFIPVN CGAIPPELLE SELFGHEKGS FTGAISSRKG RFELAEGGTL FLDEIGDMPL QMQVKLLRVL QERVFERVGG TKTINADVRV VAATHRDLET MISSNEFRED LYYRLNVFPI EMPALSERKD DVPLLLQELV SRVYNEGRGK VRFTQRAIES LKEHAWSGNV RELSNLVERL TILYPGGLVD VNDLPVKYRH IDVPEYCVEM SEEQQERDAL ASIFTSEEPV EIPETRFPSE LPPEGVNLKD LLAELEIDMI RQALELQDNV VARAAEMLGI RRTTLVEKMR KYGMTKE
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