Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1335 |
Symbol | |
ID | 4478849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1547975 |
End bp | 1549345 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639725890 |
Product | flagellar hook-associated 2 domain-containing protein |
Protein accession | YP_868975 |
Protein GI | 117919783 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.16041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0944335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTAA CAGCGACAGG TATTGGTTCA GGGTTAGATG TTGATAACAT TGTAAAAGTA TTAGTGGATG CTGAAAAAAC TCCTAAAGAA GCAATGTTTA AAGCACAAGA AGACAGCATT AAAGCTGAGG TTTCTGCTAT GGGAACCTTA AAAAGCGCAC TGACGACATT TCAGGATGCC GTAAAAAAAT TACAAACTGG CGACGCTTTA AATCAACGCA AAATATCCGT TAGTAATAGT ACATATATAA CTGCAACTGC TGATAAAACA GCTCAAACAG GTAGTTATGC TATTAAAGTT GAACAGCTCG CTGTCAATCA TAAAATTGCT GGAACGAATG TAACTGATCC TGCATTAGGT GTTGGTGAGG GAAGTCTAGC TTTTGGGGTC AATGGTAATA ATTTTTCCGT GGACGTATCG GCAACGGATT CTCTTGATGC GATAGCGAAA AAAGTCAATG AAGCACCCGA TAATGTCGGT GTCACTGCCA CCGTTATAAC CAGTGACGCC GGAAGTCGAT TAGTTTTTAG TTCCGATAAA TCTGGCGAAG ATAACCAAAT CAGCATCACG GCTACAGATA CCACAGGCTC TGGCCTTAGC AATATGTTTG ATGCAATGAA TACCACAACG CTTCAAGATG CAAAAAATGC TGTCCTCTAC ATTGATAATC AAAAAGTCAC CTCGCAAACT AATGAAGTTA AGAATGCGAT TACAGGTGTG ACTTTACAGT TAACAGATGC TGATCTTACT AAAACCACTT CACTCAAAAT AGAACAAGAT AACGATGCAG TTAAAACAAA CGTTAAGGCA TTTGTTGATG CCTACAATAG CTTAGTTACA ACGGTCGATA AGCTGTCATC CTACGATCAA GATACAAATA CTGCAGCGGC ATTGCAGGGC GACTCGATGA TCCGTTCGAT TGAATCACAA CTCCGTAGTA TTGCGAGCGA ACGAGTGCCT ACCGAAGATG GTGGTTCTAT AGCTTTGTAT GATATAGGTA TCACAACAGA TAGATATGGT AAGTTATCTA TTGATGATAC TAAGCTTGAT AAAGTGCTTT CTGAGGATAT GTCTAGTGTT GAAGCTCTCT TTGCTACACC AGAAAAAGGC TTAGCTAATC GGTTTTACGA TGTTTCTGAA AGCTATGTTA AATCCCGAGG CGTGATTGCA GATAGAGAGA CAAGTTATAC TAATCAGCAA AGTAGGTTAG CAGAACAAAG AGAAGCTTTT ACTCTTAAAA TGGACCAGTT AACTGCCCGT TTAACAAAAC AGTTTAATGC AATGGATCTT GTCGTAGGAC AACTTAACCA GCAGAGTAGT GCTTTACTTG CTAGTTTAAA CTCGCTTCCT GGAGTAGTTA AAAAGAGTTA G
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Protein sequence | MALTATGIGS GLDVDNIVKV LVDAEKTPKE AMFKAQEDSI KAEVSAMGTL KSALTTFQDA VKKLQTGDAL NQRKISVSNS TYITATADKT AQTGSYAIKV EQLAVNHKIA GTNVTDPALG VGEGSLAFGV NGNNFSVDVS ATDSLDAIAK KVNEAPDNVG VTATVITSDA GSRLVFSSDK SGEDNQISIT ATDTTGSGLS NMFDAMNTTT LQDAKNAVLY IDNQKVTSQT NEVKNAITGV TLQLTDADLT KTTSLKIEQD NDAVKTNVKA FVDAYNSLVT TVDKLSSYDQ DTNTAAALQG DSMIRSIESQ LRSIASERVP TEDGGSIALY DIGITTDRYG KLSIDDTKLD KVLSEDMSSV EALFATPEKG LANRFYDVSE SYVKSRGVIA DRETSYTNQQ SRLAEQREAF TLKMDQLTAR LTKQFNAMDL VVGQLNQQSS ALLASLNSLP GVVKKS
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