Gene Shewana3_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1304 
Symbol 
ID4479878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1519014 
End bp1520066 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content47% 
IMG OID639725858 
ProductN-acetylneuraminate synthase 
Protein accessionYP_868944 
Protein GI117919752 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03586] pseudaminic acid synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.583965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.823534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATC CAATGATTTC AATTTCAGGT CGGAAAATAG GCATAGATTA TCCTCCGTAT 
ATTGTTGCCG AACTGTCGGC CAACCATAAC GGTGATATTG AGCGCGCCAA ACAGATTATT
GCCATGGCGA AGCGCTGCAA CGCCGATGCC ATCAAGCTGC AAACCTACAG CGCCGATACC
ATCACCTTAA ACTCAAAAAA AGAAGAGTTT ATGATCCGCG GTGGTTTATG GGATGGAAAA
AGTCTTTATG AACTCTATCA ATGGGCACAA ATGCCCTGGG AGTGGCATAA GCCTTTATTT
GATTATGCAC GCAACCTAGG TATCACTATT TTCAGCTCAC CGTTCGACAA CACCGCCGTT
GATCTGCTGG AGGATTTGAA TGCACCCGTC TATAAGGTCG CGTCATTTGA GGCCATTGAT
CTACCGCTGA TAAAATACAT TGCTGGCACC GGAAAACCTA TGATTATCTC CACAGGCATG
GCCAACAGAG ATGAAATAGC AGAAGCCGTA GAGGCGGCCC GCAGCGGAGG TTGTAACGAA
CTGGCTTTAC TGCATTGTGT CAGCAGCTAT CCAGCACCTT CGTCCGAATA CAATTTAAAA
ACCATTGCCG ATTTAGCAAA ACGCTTCAAT GTCGTCGGCG GATTATCCGA CCATACCATA
GACAATGTCA CTGCAGTAAC CTCCGTGGCA GTTGGTGCAG CCATAATAGA AAAACACGTA
ACATTGGATC GAAACTCTGG CGGGCCGGAC GACAGTTTCT CCATTGAGGA GGTGGAATTA
GAGCGTCTGT GCACAGATGC CAAAATAGCC TGGCAGGCAC TGGGGAAAGT GGACTATTCG
CAGCAAAACA GCGAAAAAGC AACCATAAAA TATCGACGTT CCCTATACAT AGTTAATGAC
AAAAAGGCTG GAGAGCTGAT ACTACAAGAA GATATTCGAA GTGTGAGGCC AGGATTTGGT
TTGGCACCCA AATTCTATGA GCAAATCATA GGCCGTAAAC TGACAACCGA TGTCAGCGTA
AACTCGCCTG TCAGCTGGTC AATGTTTGAG TGA
 
Protein sequence
MTHPMISISG RKIGIDYPPY IVAELSANHN GDIERAKQII AMAKRCNADA IKLQTYSADT 
ITLNSKKEEF MIRGGLWDGK SLYELYQWAQ MPWEWHKPLF DYARNLGITI FSSPFDNTAV
DLLEDLNAPV YKVASFEAID LPLIKYIAGT GKPMIISTGM ANRDEIAEAV EAARSGGCNE
LALLHCVSSY PAPSSEYNLK TIADLAKRFN VVGGLSDHTI DNVTAVTSVA VGAAIIEKHV
TLDRNSGGPD DSFSIEEVEL ERLCTDAKIA WQALGKVDYS QQNSEKATIK YRRSLYIVND
KKAGELILQE DIRSVRPGFG LAPKFYEQII GRKLTTDVSV NSPVSWSMFE