Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1298 |
Symbol | |
ID | 4479872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1511704 |
End bp | 1512651 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725852 |
Product | hypothetical protein |
Protein accession | YP_868938 |
Protein GI | 117919746 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00235334 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAAAT CACTTGATTC TCGAGTCAGC ATAAAGCCCA GCCTAATGTA TATAGGATTG GGATTAACGC CTTTTTTAAG TTATGCCGTG TCCGCGGCTG AGGCGCGTCA ACCAGCGCAA TATAAACCAT TTAAGCTGAG CGTATCGCAG ATTAGTACCC AGAGTGCATC GGTTGCCAAT GGCGATACAG AGTTGCAGCG GGACAGCTTA TTACTCAACG CCAGCGTCAA TATTCCCCTA GATAAACAGT GGTCTATTGG AATGCGTGTC GGTTACGATA GGCTTGATTA CGATTGGCGC AATATCCGTT TAACGGGGGC GAATAACGCC GCTGGCCTGT TTAGTGATGC GGGTGAAACC TGGGAAAATA TCGACCGTTA TCGCGCGGGC CTATCCCTTA GCTATCGGAT GGATAAGCAT TGGTCCTTTA TGTTGTCGCC ACAACTTCAA TATGCCTATG CCGATACCGC ATCGGCGAGC CATGCGCAGA GTTATGGTGT GGTTGCGTCG GCCATGTATG CCTTCGAGTC GGGCAATATG CTCGGTTTTG GCGTTGCGTA TTTAAACGAT ATTGATGAAG TACGCACTAT GCCTTATCTG GCGGTGAGTT GGCAGATTAA TGATCGTTGG CGGTTAGCGA ACCCATCCCA AGCGGGATTT AGTGGCCCTG CGGGTTTGGA GCTGAGTTAT CAAGTGAGCC CTGCATGGAA TGTTGGCTTT GGTAATTCAC GTCGCACCGA GCGATTTTTA GTCGCCGATA AGGATACCGT GGTAGAGACT AACGAGTGGG TGAGTTATCT GCGTGCCGGT TGGCAAGCTA CGCCGGCTAT TGCGCTGAAT CTTTACGCGG GTTACTACTT CAATGGTGAA TTGGAAGTCA CCCATCAAGC GGCGCTCGAT ATGGATAACC AAGGCGCAGC CGCCTTGGAT CTCGAGTTCC GATTTTAA
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Protein sequence | MTKSLDSRVS IKPSLMYIGL GLTPFLSYAV SAAEARQPAQ YKPFKLSVSQ ISTQSASVAN GDTELQRDSL LLNASVNIPL DKQWSIGMRV GYDRLDYDWR NIRLTGANNA AGLFSDAGET WENIDRYRAG LSLSYRMDKH WSFMLSPQLQ YAYADTASAS HAQSYGVVAS AMYAFESGNM LGFGVAYLND IDEVRTMPYL AVSWQINDRW RLANPSQAGF SGPAGLELSY QVSPAWNVGF GNSRRTERFL VADKDTVVET NEWVSYLRAG WQATPAIALN LYAGYYFNGE LEVTHQAALD MDNQGAAALD LEFRF
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