Gene Shewana3_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1298 
Symbol 
ID4479872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1511704 
End bp1512651 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content50% 
IMG OID639725852 
Producthypothetical protein 
Protein accessionYP_868938 
Protein GI117919746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00235334 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAAAT CACTTGATTC TCGAGTCAGC ATAAAGCCCA GCCTAATGTA TATAGGATTG 
GGATTAACGC CTTTTTTAAG TTATGCCGTG TCCGCGGCTG AGGCGCGTCA ACCAGCGCAA
TATAAACCAT TTAAGCTGAG CGTATCGCAG ATTAGTACCC AGAGTGCATC GGTTGCCAAT
GGCGATACAG AGTTGCAGCG GGACAGCTTA TTACTCAACG CCAGCGTCAA TATTCCCCTA
GATAAACAGT GGTCTATTGG AATGCGTGTC GGTTACGATA GGCTTGATTA CGATTGGCGC
AATATCCGTT TAACGGGGGC GAATAACGCC GCTGGCCTGT TTAGTGATGC GGGTGAAACC
TGGGAAAATA TCGACCGTTA TCGCGCGGGC CTATCCCTTA GCTATCGGAT GGATAAGCAT
TGGTCCTTTA TGTTGTCGCC ACAACTTCAA TATGCCTATG CCGATACCGC ATCGGCGAGC
CATGCGCAGA GTTATGGTGT GGTTGCGTCG GCCATGTATG CCTTCGAGTC GGGCAATATG
CTCGGTTTTG GCGTTGCGTA TTTAAACGAT ATTGATGAAG TACGCACTAT GCCTTATCTG
GCGGTGAGTT GGCAGATTAA TGATCGTTGG CGGTTAGCGA ACCCATCCCA AGCGGGATTT
AGTGGCCCTG CGGGTTTGGA GCTGAGTTAT CAAGTGAGCC CTGCATGGAA TGTTGGCTTT
GGTAATTCAC GTCGCACCGA GCGATTTTTA GTCGCCGATA AGGATACCGT GGTAGAGACT
AACGAGTGGG TGAGTTATCT GCGTGCCGGT TGGCAAGCTA CGCCGGCTAT TGCGCTGAAT
CTTTACGCGG GTTACTACTT CAATGGTGAA TTGGAAGTCA CCCATCAAGC GGCGCTCGAT
ATGGATAACC AAGGCGCAGC CGCCTTGGAT CTCGAGTTCC GATTTTAA
 
Protein sequence
MTKSLDSRVS IKPSLMYIGL GLTPFLSYAV SAAEARQPAQ YKPFKLSVSQ ISTQSASVAN 
GDTELQRDSL LLNASVNIPL DKQWSIGMRV GYDRLDYDWR NIRLTGANNA AGLFSDAGET
WENIDRYRAG LSLSYRMDKH WSFMLSPQLQ YAYADTASAS HAQSYGVVAS AMYAFESGNM
LGFGVAYLND IDEVRTMPYL AVSWQINDRW RLANPSQAGF SGPAGLELSY QVSPAWNVGF
GNSRRTERFL VADKDTVVET NEWVSYLRAG WQATPAIALN LYAGYYFNGE LEVTHQAALD
MDNQGAAALD LEFRF