| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1290 |
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| Symbol | |
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| ID | 4479864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1500882 |
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| End bp | 1501874 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639725844 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_868930 |
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| Protein GI | 117919738 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC CTTTCCGCTT TCACGCTTTG CCGTTGATCC TGCTTGCCCT CGCGGGCTGC
GCCTCGCAGG GCAAGCCGCC GCCGACCATC TCACTTGATG AGTCAGTGCT GGCCCAGCCG
CTGCCCGAAC CGCTCGCGCC GGTGGAAGTC GTCGCCGTCC CCGAGCCGCT GGCGTTGCCG
GCGCAGTTGA AGCCACTGCC GGAGGTCGAT GCGGCCCCGG CTGCGCCGGA GCCAGCCGAC
GAGAAGGTAC GTGTTTCCCG TGCCAACGCC GAGGCACGCA TCGCACCCAC ACGCGAGGGC
TACGTCAATG CTATCCAGGT GTGGCCTTTC ACCGATGGTG CGCTTTATCA GGTCTATGCC
TCGCCGGGGC GCGTGACCGT GGTTTCGCTC CAGCCGGGCG AGGAACTGGT GACGGTCGCC
GCCGGCGATA CCGTGCGCTG GATCGTGGGC GACACGTCCA GCGGCAGCAG CGACGCGCTG
CGCGTTAATG TGCTGGTCAA GCCCATCCGC TCGGGCCTGA AAACCAATCT GGTCATCACC
ACCAGCCGGC GCACCTACCT GCTGGAGCTG ACCTCAACGG AAAAGGCATG GATGGCCTCG
GTATCCTGGG ACTATCCACG CGACCGGATG CTGGCCTTGC AGCGCCAGTC GCAGGCGGCC
AGCGCCGCCG CGCCAGTCGA TACCGGCCTG GCGTTGGAGA AGATCCGCTT CCGTTACGCG
GTATCGGGCA GCAACCCGCC GTGGAAGCCG CTGCGTGCCT TCGATGACGG CGAGAAGGTC
TATATCCAGT TTCCGGCGGG CATTGCCCAG GGCGAGCTGC CGCCGCTGTT CGTCATCGGC
GTGCAGGGCG ACGGGCAACT GGTGAATTAT CGTTTCCGCT CGCCGTACTA CATCGTGGAT
CGCCTGTTCG GCGCGGCCGA ACTGCGGCTG GGCGGCGATG GCGGCGACGT GGTGCGGATC
GAGCGCACCG ATGGCGTGGC GCGGAGGAAC TGA
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| Protein sequence | MNLPFRFHAL PLILLALAGC ASQGKPPPTI SLDESVLAQP LPEPLAPVEV VAVPEPLALP
AQLKPLPEVD AAPAAPEPAD EKVRVSRANA EARIAPTREG YVNAIQVWPF TDGALYQVYA
SPGRVTVVSL QPGEELVTVA AGDTVRWIVG DTSSGSSDAL RVNVLVKPIR SGLKTNLVIT
TSRRTYLLEL TSTEKAWMAS VSWDYPRDRM LALQRQSQAA SAAAPVDTGL ALEKIRFRYA
VSGSNPPWKP LRAFDDGEKV YIQFPAGIAQ GELPPLFVIG VQGDGQLVNY RFRSPYYIVD
RLFGAAELRL GGDGGDVVRI ERTDGVARRN
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