| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1289 |
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| Symbol | |
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| ID | 4479863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1500181 |
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| End bp | 1500885 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639725843 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_868929 |
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| Protein GI | 117919737 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA AACGACCGCA GGTGCGCTAC GCCGATACGC CGCAGCCTGC CACCCCGTAT
CAAGCCGCCG CCCAGGTGTG GGACGAGCGT ATCGGCTCGG CCCGCGTGCA GGCCAAGAAC
TGGCGGCTGA TGGCCTTCGG CTGCCTGGTG CTCGCGCTAC TGATGGCCGG TGGCCTGGTA
TGGCGCTCGG CGCAGTCCAT CGTGACGCCT TACGTCATCG AGGTCGATCA GGCCGGACAG
GTTCGCGCCG TGGGCGAGGC CGCCACGCCG TACCGGCCCG CCGATGCGCA GATCGCGCAC
CACCTGGCAC GCTTCGTCAG CCTGGTGCGC TCGCTGTCCA TCGACCCCAT CGTCGTGCGG
CAAAACTGGC TCGATGCCTA CGACTACACC ACCGACCGGG GCGCGGCCGT GCTCAACGAC
TACGCCCGCA CCAATGATCC ATTCGCTCGC ATCGGCAAGG AATCGGTGAC GGTGCAGATC
ACCAGCGTGG TGCGTGCCAG CGACACGTCT TTCAACGTGC GCTGGACGGA GCAACGGTTC
GTCAATGGCG CACCCGCTGG CACCGAACGC TGGAACGCCG TGCTTTCCAC CGTCCTGCAA
ACCCCGCGCA CCGAACAGCG CCTGCGCAAG AACCCGTTGG GTATCTACGT CAACGGCCTG
TCGTGGAGCC GCGAACTGGA TTCTTCCGAA GGAGCCAAGC CATGA
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| Protein sequence | MRFKRPQVRY ADTPQPATPY QAAAQVWDER IGSARVQAKN WRLMAFGCLV LALLMAGGLV
WRSAQSIVTP YVIEVDQAGQ VRAVGEAATP YRPADAQIAH HLARFVSLVR SLSIDPIVVR
QNWLDAYDYT TDRGAAVLND YARTNDPFAR IGKESVTVQI TSVVRASDTS FNVRWTEQRF
VNGAPAGTER WNAVLSTVLQ TPRTEQRLRK NPLGIYVNGL SWSRELDSSE GAKP
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