| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1280 |
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| Symbol | |
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| ID | 4479854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1491078 |
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| End bp | 1493075 |
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| Gene Length | 1998 bp |
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| Protein Length | 665 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639725834 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_868920 |
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| Protein GI | 117919728 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTC AGGGCGTACT GTTTGGGCAG ATCGCTGCCG TTTTCGGCAT CGTGATCGCC
GGTGTGTGGG GAGCCACACA ATGGACTGCC GCCGCTCTGG GCTATCAGCT ACGCCTCGGT
TTGCCTTGGT TTGATCTCTT CGGCACACCG GTTTATCCCC CTTGGAAATT ATTCGAATGG
TGGTTCTTCT TTGGCGCTTA CGCGCCGGAA GTTTTCGACA CCGGTGGAGC GATTGCCGCC
TGCAGTGGCC TGATGGCCGT CGTCGTTGCC ATCACCATGT CGGTATGGCG TTCTCGGCAA
TCCAAGCGGG TCACCACCTA TGGGTCAGCA CGCTGGGCCA ACGCCTCCGA TATCCGTAAG
GCCAAACTGT CCGAGCCGAT GGGTGTTTTT CTCGGGCTGC ACAACGACCA ATACCTGCGC
CATGAAGGTC CAGAACATGT ACTCGCCTTC GCACCGACGC GCTCCGGCAA GGGTGTTGGT
CTTGTCGTCC CAACGCTACT GTCTTGGCCC GCCTCTGTGG TTATCCACGA CATCAAAGGT
GAGAACTGGC AGCTCACTGC CGGCTGGCGT TCGCGCTTCT CACACTGCCT ACTGTTCAAT
CCCACCGATT CGAACTCGGC CGGCTACAAC CCGTTGCTGG AAGTACGGCG TGGCGCGCAT
GAAGTGCGCG ACGTGCAAAA CATTGCCGAC ATCCTGGTTG ATCCCGAAGG CGCGCTAGAG
CGTCGCAATC ACTGGGAAAA AACCAGTCAT GCGCTGCTAG TGGGTGCCAT CCTGCATGTG
CTTTATGCAG GCGAAGACAA AACGCTGTGC GGTGTCGCCA ATTTCCTGTC CGATCCGGCG
TGCCCGTTCG AACTGGCCCT GCACCGGATG ATGACGACGA AGCACTTGGG CGATAAGCCG
CATCCAGTGG TGGCTTCTGC TGCACGGGAA GTTCTCAACA AGGCAGACAA TGAGCGTTCG
GGTGTGCTCT CCACTGCTAT GTCCTTCCTG GGGTTGTACC GTGACCCCAC GGTGGCAGAA
GTCACGTCAC GCTGTGACTG GCGCATCGCT GATCTTATTG CGGCCGAGCA CCCTGTTTCG
TTGTACCTGG TGGTACCGCC ATCGGACATC AGCCGGACTA AACCGCTTAT CCGGCTGATC
CTCAACCAGA TAGGGCGTCG GCTCACGGAG TCACTCGATG GCTCTGACGG CATTCAAAGG
CGCCACAAGC TGCTGCTAAT GCTCGATGAG TTCCCGGCGC TTGGCCGGCT CGATTTCTTT
GAGACTGCTC TGGCTTTTAT GGCCGGCTAC GGCATCCGCA GCTTCCTCAT CGCGCAAAGC
CTGAACCAGA TCGACAAGGC GTATGGGCAG AACCATTCGA TTCTGGACAA CTGCCATGTA
CGAGTGACGT TTGCCACCAA CGACGAGCGT ACCGCCAAGC GCATTTCCGA GACGTTGGGC
ACCGCCACCG AACTGCGCGC GCAGCGCAAC TATGCCGGCC ACCGGCTCGC GCCGTGGTTG
GGCCATCTGA TGGTGTCACG GCAGGAAACC GCACGGCCAC TGCTGACGCC TGGCGAAGTG
ATGCAGCTTC CGCCAGACGA ATCGGTGGTG ATGGTGTCCA GCGTCGCGCC GATCAAGGCG
AAGAAATTGC GCTACTACGC CGACGCCAAC TTCAAGCGCC GCGTACTACC GCCGCCCACG
CTGGCAGCCG GGCAGTACGC CGACGCGCCG CCATCGCGGC TCGACGACTG GGGCGACCTG
GCGATCCCGA CCGTGCCTGT GGCGCTGGCC ACGGCATCCG CCGATGACCC CGGCGGCGCC
GACGACGGCG GCCTGCGCCG CCAGCCCGAA CTCTCCGAAA CCGTCGCCTA CGACCCCGAG
CCGGACGCAC ACGCTTCCGA CCTCGCGCTG CTCGATGACG ACGACCTGCC GCTGCCGCTT
CCCGGCCAGC TCGACCCGGC CATGCAGCGC ACGGCCCGGC TGGCTTCCCT CGACCCCAAC
GACGGAATCG ACTTATGA
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| Protein sequence | MQAQGVLFGQ IAAVFGIVIA GVWGATQWTA AALGYQLRLG LPWFDLFGTP VYPPWKLFEW
WFFFGAYAPE VFDTGGAIAA CSGLMAVVVA ITMSVWRSRQ SKRVTTYGSA RWANASDIRK
AKLSEPMGVF LGLHNDQYLR HEGPEHVLAF APTRSGKGVG LVVPTLLSWP ASVVIHDIKG
ENWQLTAGWR SRFSHCLLFN PTDSNSAGYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
RRNHWEKTSH ALLVGAILHV LYAGEDKTLC GVANFLSDPA CPFELALHRM MTTKHLGDKP
HPVVASAARE VLNKADNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIQR RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDESVV MVSSVAPIKA
KKLRYYADAN FKRRVLPPPT LAAGQYADAP PSRLDDWGDL AIPTVPVALA TASADDPGGA
DDGGLRRQPE LSETVAYDPE PDAHASDLAL LDDDDLPLPL PGQLDPAMQR TARLASLDPN
DGIDL
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