Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1219 |
Symbol | |
ID | 4477139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1422825 |
End bp | 1423346 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725774 |
Product | acetyltransferase |
Protein accession | YP_868860 |
Protein GI | 117919668 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.846102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTCGCCG CTAATTCAAT CGAAAAGCCA GTCGAAGTCG TCCCCTATCA GCGCTGTTAT GCGCGTGCGG TGAGTGAACT CTTTCATCAG TGCGTGCATC AAATACAACA TGAGCGTTAT AACGCCGCGC AGCTCAAGGC TTGGTCGCAG GCGCCCCGCT CGAGTCAGCA TTGGCATTTA CGCTTAAGTC GTTCCCAAGC TTGGATTATT TTGGTGACAG ATGCCGCGAG CTTATCTAAG ATTTGTGCAG GTTTTATCAA TGTCGAAACG GATTTTCACC ATAGAGGATA TATAGATAGC CTCTATATTC ATCCAGATTG GCAACGGCAA GGGCTGGGGG AGCGAGCTTA TCGACAGCTC GAACAGTGGG CAAAAGAGCA GGGCTATTGT CAATTGAGTG CCGATGCATC TTATCTTTCC CGCGGGCTGT TTATTAAGCT CGGATTTGTC CAACAGCAGC GCAGCTATCA ACAAAAACTG GGCCAAGTGT TGCCGAGTTT TTATATGACT AAAAAACTGT AA
|
Protein sequence | MFAANSIEKP VEVVPYQRCY ARAVSELFHQ CVHQIQHERY NAAQLKAWSQ APRSSQHWHL RLSRSQAWII LVTDAASLSK ICAGFINVET DFHHRGYIDS LYIHPDWQRQ GLGERAYRQL EQWAKEQGYC QLSADASYLS RGLFIKLGFV QQQRSYQQKL GQVLPSFYMT KKL
|
| |