Gene Shewana3_1219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1219 
Symbol 
ID4477139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1422825 
End bp1423346 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID639725774 
Productacetyltransferase 
Protein accessionYP_868860 
Protein GI117919668 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.846102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGCCG CTAATTCAAT CGAAAAGCCA GTCGAAGTCG TCCCCTATCA GCGCTGTTAT 
GCGCGTGCGG TGAGTGAACT CTTTCATCAG TGCGTGCATC AAATACAACA TGAGCGTTAT
AACGCCGCGC AGCTCAAGGC TTGGTCGCAG GCGCCCCGCT CGAGTCAGCA TTGGCATTTA
CGCTTAAGTC GTTCCCAAGC TTGGATTATT TTGGTGACAG ATGCCGCGAG CTTATCTAAG
ATTTGTGCAG GTTTTATCAA TGTCGAAACG GATTTTCACC ATAGAGGATA TATAGATAGC
CTCTATATTC ATCCAGATTG GCAACGGCAA GGGCTGGGGG AGCGAGCTTA TCGACAGCTC
GAACAGTGGG CAAAAGAGCA GGGCTATTGT CAATTGAGTG CCGATGCATC TTATCTTTCC
CGCGGGCTGT TTATTAAGCT CGGATTTGTC CAACAGCAGC GCAGCTATCA ACAAAAACTG
GGCCAAGTGT TGCCGAGTTT TTATATGACT AAAAAACTGT AA
 
Protein sequence
MFAANSIEKP VEVVPYQRCY ARAVSELFHQ CVHQIQHERY NAAQLKAWSQ APRSSQHWHL 
RLSRSQAWII LVTDAASLSK ICAGFINVET DFHHRGYIDS LYIHPDWQRQ GLGERAYRQL
EQWAKEQGYC QLSADASYLS RGLFIKLGFV QQQRSYQQKL GQVLPSFYMT KKL