Gene Shewana3_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1192 
Symbol 
ID4478709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1399561 
End bp1400109 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content45% 
IMG OID639725747 
Productprotein of unknown function YGGT 
Protein accessionYP_868833 
Protein GI117919641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0499744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.653735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT TAACCTTTTT GATCAGCACA CTCTTCGATT TGTATTTGAT GGTGGTGATA 
TTACGGATCT GGCTCCCCTT GGCCCGTGCC GATTTTTATA ATCCCTTCAG TCAGTTTGTG
GTCAAAGCCA CTCACCCGTT GATCGCACCT ATGCGTCGAT TAATTCCTTC AATGGGAAGA
TTCGACACTT CTTCATTTGT GCTCGCCCTA TTAGTGGTGA TGGTCAAAGT GCTGCTGATA
AGTCTTATTG CCGGCGGCGG TATTGATATA GTGCTGTTCT TTGTGTTTGC GCTTGTTACT
GTCATCAAGC AGGCGGGCAT TTTGCTCTTC TGGATGCTGA TCATTCGTGC AATTTTAAGC
TGGTTCAATC AAGGCTATAA CCCCATTGTG ATGATCATGG GACAACTAAC AGAGCCCATT
TTAGCACCAG TGCGCCGCAT TATTCCGCCC ATTGGTGGCT TAGATCTGTC GGTGATGTTA
GTGATTATCG GCATGAACTT TATCAACATG CTGTTGGCGC AATACGTACC ATTTTGGGCC
GTGATTTAA
 
Protein sequence
MNALTFLIST LFDLYLMVVI LRIWLPLARA DFYNPFSQFV VKATHPLIAP MRRLIPSMGR 
FDTSSFVLAL LVVMVKVLLI SLIAGGGIDI VLFFVFALVT VIKQAGILLF WMLIIRAILS
WFNQGYNPIV MIMGQLTEPI LAPVRRIIPP IGGLDLSVML VIIGMNFINM LLAQYVPFWA
VI