Gene Shewana3_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1190 
Symbol 
ID4478707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1398768 
End bp1399202 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content45% 
IMG OID639725745 
Producthypothetical protein 
Protein accessionYP_868831 
Protein GI117919639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.201657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTA ATCTCCTTAT TATGCTCGCC TTAACCGCAA GCCTGTGCGG TATCGCTAAT 
GCCGAGCAAA AAGAAACCGT CGGTAATTTC GACATTCATT ACATGGCGCT GGGCAGCACT
TTTTTAACGC CTAGTATTGC GAAATCCTAT GGCATCGAAC GCAGTAGCTA CAGAGGCATC
ATTAACATTG CCGTATTAGA TATGAGTGAA GAAGGCTCAC CCGCAGTGCC CGTGGAAATC
ACTGGCGTAG CCAATAACCT ACTCGATGCA CGTATCGATT TGAAATTTAG AGAGATCCGT
GAGGGTAAGG CGATTTACTA CATCGCCGAA GTACCTTACC GCGACGATCA AGAAATCAAT
TTCAACATCG CCATCAAACA CGGCAACCAA CTCAACACCA ATCTGCAGTT TAAGCAAAAG
TTCTACGTCG AATAA
 
Protein sequence
MLRNLLIMLA LTASLCGIAN AEQKETVGNF DIHYMALGST FLTPSIAKSY GIERSSYRGI 
INIAVLDMSE EGSPAVPVEI TGVANNLLDA RIDLKFREIR EGKAIYYIAE VPYRDDQEIN
FNIAIKHGNQ LNTNLQFKQK FYVE